RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 GPR150Q8NGU9 434 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 OR10K1Q8NGX5 313 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 ST7LQ8TDW4 575 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CSGALNACT1Q8TDX6 532 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GEMIN6Q8WXD5 167 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 TM9SF4Q92544 642 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 LPPQ93052 612 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 FATE1Q969F0 183 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 RFKQ969G6 155 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 RGMAQ96B86 450 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 RAB3CQ96E17 227 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 MRPS24Q96EL2 167 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 C1GALT1C1Q96EU7 318 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 TRMT61AQ96FX7 289 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 WBP1Q96G27 269 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 C12orf42Q96LP6 360 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 LRFN5Q96NI6 719 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 TRIB3Q96RU7 358 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 S100A13Q99584 98 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 FDXACB1Q9BRP7 624 aaPredicted RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 DOHHQ9BU89 302 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CRB3Q9BUF7 120 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SEC11CQ9BY50 192 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 DUSP16Q9BY84 665 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GPR61Q9BZJ8 451 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 ARL6Q9H0F7 186 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF768Q9H5H4 540 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 PIF1Q9H611 641 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CLMPQ9H6B4 373 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 METTL17Q9H7H0 456 aaPredicted RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 RPF1Q9H9Y2 349 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 FZD3Q9NPG1 666 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 KRCC1Q9NPI7 259 aaPredicted RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 THSD1Q9NS62 852 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CYSLTR2Q9NS75 346 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC22A11Q9NSA0 550 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 TREX1Q9NSU2 369 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 NRBP2Q9NSY0 501 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GPATCH2LQ9NWQ4 482 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 VNN3Q9NY84 501 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 GDE1Q9NZC3 331 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 PIM2Q9P1W9 311 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 NFKBIL1Q9UBC1 381 aaPredicted RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 RPS6KB2Q9UBS0 482 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CYTH4Q9UIA0 394 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 TSPAN16Q9UKR8 245 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 TP53TG5Q9Y2B4 290 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 CA5BQ9Y2D0 317 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 LSM2Q9Y333 95 aaKnown RBP5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC22A7Q9Y694 548 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 POMT1Q9Y6A1 747 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 SCN9AQ15858 1988 aa5.34□□□□□ -1.55
VTI1BP4-201ENST00000427516 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.34□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF831Q5JPB2 1677 aa5.34□□□□□ -1.56
VTI1BP4-201ENST00000427516 KAT6AQ92794 2004 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ANKRD31Q8N7Z5 1873 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC12A8A0AV02 714 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR6C74A6NCV1 312 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 NEMP2A6NFY4 417 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 C5orf52A6NGY3 159 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZAR1LA6NP61 321 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 MCRIP1C9JLW8 97 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 E9PI62 339 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 BLOC1S5-TXNDC5H3BN57 136 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMEM189-UBE2V1I3L0A0 370 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 I6L893 689 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 FZD9O00144 591 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TLR4O00206 839 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 RFXANKO14593 260 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 DCLK1O15075 740 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 MID1O15344 667 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 GSTZ1O43708 216 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 GMFGO60234 142 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 KLK8O60259 260 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 GREM1O60565 184 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 CSO75390 466 aaKnown RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR2F2O95006 317 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 IFNA17P01571 189 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 MBP02144 154 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 HIST1H2ABP04908 130 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ALDOBP05062 364 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 GLAP06280 429 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 LPLP06858 475 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ACAA1P09110 424 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 SPP1P10451 314 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF14P17017 642 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TYRP1P17643 537 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 LAG3P18627 525 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 APEX1P27695 318 aaKnown RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 PDHA2P29803 388 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 SSTR2P30874 369 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ICAM3P32942 547 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 GRK5P34947 590 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ACTR1BP42025 376 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZFP36L2P47974 494 aaKnown RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 SULT1E1P49888 294 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 MMP15P51511 669 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TAS2R43P59537 309 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 PSMA6P60900 246 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms