RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 OR10A5Q9H207 317 aa12.59□□□□□ -0.39
SNX3-204ENST00000426155 ANKRA2Q9H9E1 313 aa12.59□□□□□ -0.39
SNX3-204ENST00000426155 PFDN4Q9NQP4 134 aa12.59□□□□□ -0.39
SNX3-204ENST00000426155 GIMAP2Q9UG22 337 aa12.59□□□□□ -0.39
SNX3-204ENST00000426155 SH3BGRL2Q9UJC5 107 aa12.59□□□□□ -0.39
SNX3-204ENST00000426155 KLF13Q9Y2Y9 288 aaPredicted RBP12.59□□□□□ -0.39
SNX3-204ENST00000426155 SPTBN1Q01082 2364 aaKnown RBP12.58□□□□□ -0.4
SNX3-204ENST00000426155 GTF3C1Q12789 2109 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 WDR91A4D1P6 747 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 H3BQF6 201 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 CDK2AP1O14519 115 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 LRRTM2O43300 516 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 NPHS1O60500 1241 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 NME6O75414 186 aaPredicted RBP12.58□□□□□ -0.4
SNX3-204ENST00000426155 RSL1D1O76021 490 aaKnown RBP12.58□□□□□ -0.4
SNX3-204ENST00000426155 ATP1B1P05026 303 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 BPGMP07738 259 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 LINC00032P0C843 101 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 PCSK2P16519 638 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 CSNK2A2P19784 350 aaPredicted RBP12.58□□□□□ -0.4
SNX3-204ENST00000426155 S1PR1P21453 382 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 TACR1P25103 407 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 DNASE1L1P49184 302 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 ZNF763Q0D2J5 394 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 FUT7Q11130 342 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 MPEG1Q2M385 716 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 TRMT12Q53H54 448 aaKnown RBP12.58□□□□□ -0.4
SNX3-204ENST00000426155 DOPEY1Q5JWR5 2465 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 SH2D4BQ5SQS7 431 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 Q6ZSR9 355 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 GPALPP1Q8IXQ4 340 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 PRR22Q8IZ63 422 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 LRRC25Q8N386 305 aaPredicted RBP12.58□□□□□ -0.4
SNX3-204ENST00000426155 ZNF441Q8N8Z8 693 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 C7orf57Q8NEG2 295 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 OR5M3Q8NGP4 307 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 SSC4DQ8WTU2 575 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 GPR137Q96N19 417 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 TRMOQ9BU70 441 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 ITPAQ9BY32 194 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 TIMMDC1Q9NPL8 285 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.58□□□□□ -0.4
SNX3-204ENST00000426155 SIRT5Q9NXA8 310 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 EXO1Q9UQ84 846 aaKnown RBP12.58□□□□□ -0.4
SNX3-204ENST00000426155 DNAJC15Q9Y5T4 150 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 ZNF407Q9C0G0 2248 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 NINQ8N4C6 2090 aa12.58□□□□□ -0.4
SNX3-204ENST00000426155 C2orf92A0A1B0GVN3 265 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 A1L4Q6 167 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 OR6C76A6NM76 312 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 FAM166BA8MTA8 275 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 PIP5K1BO14986 540 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 HS6ST1O60243 411 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 LYPLA1O75608 230 aaPredicted RBP12.57□□□□□ -0.4
SNX3-204ENST00000426155 CBX7O95931 251 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 LDLRP01130 860 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 GPX3P22352 226 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 PIGAP37287 484 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 SERPINB4P48594 390 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 C2orf80Q0P641 193 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 MPP2Q14168 576 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 HEPACAMQ14CZ8 416 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 KIAA0040Q15053 153 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 ZNF791Q3KP31 576 aaPredicted RBP12.57□□□□□ -0.4
SNX3-204ENST00000426155 UGT3A2Q3SY77 523 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 C4orf17Q53FE4 359 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 ZNF628Q5EBL2 1059 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 TNFAIP8L3Q5GJ75 292 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 C6orf163Q5TEZ5 329 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 PRAMEF20Q5VT98 475 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 HIST2H2BCQ6DN03 193 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 NOXRED1Q6NXP6 359 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 OPN5Q6U736 354 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 RTL4Q6ZR62 310 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 FJX1Q86VR8 437 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 TICAM1Q8IUC6 712 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 DDIASQ8IXT1 998 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 CCDC116Q8IYX3 515 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 OR2M7Q8NG81 312 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 OR10G3Q8NGC4 313 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 OR9A2Q8NGT5 310 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 C16orf52Q8NHV5 167 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.57□□□□□ -0.45e-37■■■■□ 21.8
SNX3-204ENST00000426155 SLC22A8Q8TCC7 542 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 TWIST2Q8WVJ9 160 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 KAT2AQ92830 837 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 SPACA9Q96E40 222 aaPredicted RBP12.57□□□□□ -0.4
SNX3-204ENST00000426155 EGLN2Q96KS0 407 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 PSMG3-AS1Q96PY0 264 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 ZNF395Q9H8N7 513 aaPredicted RBP12.57□□□□□ -0.4
SNX3-204ENST00000426155 SENP1Q9P0U3 644 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 BCAP29Q9UHQ4 241 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 ZNF639Q9UID6 485 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 SLC5A6Q9Y289 635 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 ZNF780BQ9Y6R6 833 aa12.57□□□□□ -0.4
SNX3-204ENST00000426155 MYO7BQ6PIF6 2116 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 TRGV8A0A0C4DH27 118 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 CYSRT1A8MQ03 144 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 KLRC4-KLRK1H3BQV0 150 aa12.56□□□□□ -0.4
SNX3-204ENST00000426155 TFECO14948 347 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms