RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 C9orf40Q8IXQ3 194 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 ARMC10Q8N2F6 343 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 ZNF615Q8N8J6 731 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 LSM14AQ8ND56 463 aaKnown RBP22.74■■□□□ 1.23
VEGFA-209ENST00000425836 SIMC1Q8NDZ2 872 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 OR7G1Q8NGA0 311 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 TEX37Q96LM6 180 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 ACSS1Q9NUB1 689 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-209ENST00000425836 ATAD3AQ9NVI7 634 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 FAM53CQ9NYF3 392 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 NBEAQ8NFP9 2946 aa22.74■■□□□ 1.23
VEGFA-209ENST00000425836 CBX7O95931 251 aa22.73■■□□□ 1.23
VEGFA-209ENST00000425836 RPS6KA2Q15349 733 aa22.73■■□□□ 1.23
VEGFA-209ENST00000425836 MEP1AQ16819 746 aa22.73■■□□□ 1.23
VEGFA-209ENST00000425836 ABHD17BQ5VST6 288 aa22.73■■□□□ 1.23
VEGFA-209ENST00000425836 ZBED6CLQ96FA7 236 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-209ENST00000425836 BBC3Q96PG8 261 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-209ENST00000425836 OR10A5Q9H207 317 aa22.73■■□□□ 1.23
VEGFA-209ENST00000425836 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.73■■□□□ 1.233e-7■■□□□ 12.5
VEGFA-209ENST00000425836 A0A0G2JND7 137 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 TROVE2P10155 538 aaKnown RBP eCLIP22.72■■□□□ 1.233e-17■■■□□ 18.6
VEGFA-209ENST00000425836 EFNA1P20827 205 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-209ENST00000425836 MANFP55145 182 aaKnown RBP22.72■■□□□ 1.23
VEGFA-209ENST00000425836 MLF1P58340 268 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 DUSP8Q13202 625 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 EXOSC7Q15024 291 aaKnown RBP22.72■■□□□ 1.23
VEGFA-209ENST00000425836 PGS1Q32NB8 556 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 PDCD4Q53EL6 469 aaKnown RBP22.72■■□□□ 1.23
VEGFA-209ENST00000425836 LGI4Q8N135 537 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 NATD1Q8N6N6 113 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 OR7G2Q8NG99 324 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 TESCQ96BS2 214 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 ERP27Q96DN0 273 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 DUSP26Q9BV47 211 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 BHLHE41Q9C0J9 482 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-209ENST00000425836 CLMPQ9H6B4 373 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 ANKRA2Q9H9E1 313 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 LIN28AQ9H9Z2 209 aaKnown RBP22.72■■□□□ 1.23
VEGFA-209ENST00000425836 SDR39U1Q9NRG7 319 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-209ENST00000425836 OR6C76A6NM76 312 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 PLOD3O60568 738 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 IL12AP29459 219 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 CLNS1AP54105 237 aaKnown RBP22.72■■□□□ 1.23
VEGFA-209ENST00000425836 IGFL3Q6UXB1 125 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 C16orf47Q6ZP98 133 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-209ENST00000425836 OR52R1Q8NGF1 315 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 OR5L2Q8NGL0 311 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 ZFP28Q8NHY6 868 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 EPS8L2Q9H6S3 715 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 MYOTQ9UBF9 498 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 BCAP29Q9UHQ4 241 aa22.72■■□□□ 1.23
VEGFA-209ENST00000425836 PLOD2O00469 737 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 SRSF11Q05519 484 aaKnown RBP22.71■■□□□ 1.23
VEGFA-209ENST00000425836 HSPB3Q12988 150 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 MLC1Q15049 377 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 FHL5Q5TD97 284 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 TMEM107Q6UX40 140 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 SLC29A4Q7RTT9 530 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 BEST3Q8N1M1 668 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 NUBPLQ8TB37 319 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 TM9SF4Q92544 642 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 ELP4Q96EB1 424 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 CHMP6Q96FZ7 201 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 PLA2G3Q9NZ20 509 aa22.71■■□□□ 1.23
VEGFA-209ENST00000425836 A0A1W2PRB8 838 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 C9JVG2 144 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 SLITRK5O94991 958 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 WDPCPO95876 746 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 MC3RP41968 323 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 CD97P48960 835 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 ST13P50502 369 aaKnown RBP22.7■■□□□ 1.22
VEGFA-209ENST00000425836 WNT3P56703 355 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 SF3A3Q12874 501 aaKnown RBP eCLIP22.7■■□□□ 1.229e-12■■■■■ 32
VEGFA-209ENST00000425836 EBPQ15125 230 aaKnown RBP22.7■■□□□ 1.22
VEGFA-209ENST00000425836 OR4F3Q6IEY1 312 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 HPS6Q86YV9 775 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 OR8J2Q8NGG1 315 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 C16orf52Q8NHV5 167 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 RILPQ96NA2 401 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 TMEM120AQ9BXJ8 343 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 ZIM2Q9NZV7 527 aa22.7■■□□□ 1.22
VEGFA-209ENST00000425836 A0A087WV62 115 aa22.69■■□□□ 1.22
VEGFA-209ENST00000425836 WWP2O00308 870 aa22.69■■□□□ 1.22
VEGFA-209ENST00000425836 SLC22A3O75751 556 aa22.69■■□□□ 1.22
VEGFA-209ENST00000425836 BCAS2O75934 225 aaPredicted RBP22.69■■□□□ 1.22
VEGFA-209ENST00000425836 GPC1P35052 558 aa22.69■■□□□ 1.22
VEGFA-209ENST00000425836 KIR3DL1P43629 444 aa22.69■■□□□ 1.22
VEGFA-209ENST00000425836 CDK9P50750 372 aaKnown RBP22.69■■□□□ 1.22
VEGFA-209ENST00000425836 PHC1P78364 1004 aa22.69■■□□□ 1.22
VEGFA-209ENST00000425836 SPANXN4Q5MJ08 99 aa22.69■■□□□ 1.22
VEGFA-209ENST00000425836 MIER2Q8N344 545 aa22.69■■□□□ 1.22
VEGFA-209ENST00000425836 OR5P2Q8WZ92 322 aa22.69■■□□□ 1.22
VEGFA-209ENST00000425836 HAS2Q92819 552 aa22.69■■□□□ 1.22
VEGFA-209ENST00000425836 WWTR1Q9GZV5 400 aa22.69■■□□□ 1.22
VEGFA-209ENST00000425836 UPK1AO00322 258 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 PRAMEF2O60811 474 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 ITGA10O75578 1167 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 F10P00742 488 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 IFI6P09912 130 aa22.68■■□□□ 1.22
VEGFA-209ENST00000425836 GPX3P22352 226 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms