RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 FAM111BQ6SJ93 734 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 OLIG3Q7RTU3 272 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 SLC35F3Q8IY50 421 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 ZDHHC12Q96GR4 267 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 ZNF285Q96NJ3 590 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 COL21A1Q96P44 957 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 MRPS26Q9BYN8 205 aaKnown RBP24.88■■□□□ 1.57
LDB1-202ENST00000425280 EXD2Q9NVH0 621 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 DDX18Q9NVP1 670 aaKnown RBP24.88■■□□□ 1.57
LDB1-202ENST00000425280 ORC6Q9Y5N6 252 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 LYVE1Q9Y5Y7 322 aa24.88■■□□□ 1.57
LDB1-202ENST00000425280 GPC6Q9Y625 555 aaPredicted RBP24.88■■□□□ 1.57
LDB1-202ENST00000425280 MITFO75030 526 aaPredicted RBP24.87■■□□□ 1.57
LDB1-202ENST00000425280 FESP07332 822 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 CHRM4P08173 479 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 SOX18P35713 384 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 XCR1P46094 333 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 RAD23AP54725 363 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 TTC23Q5W5X9 447 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 TTC33Q6PID6 262 aaPredicted RBP24.87■■□□□ 1.57
LDB1-202ENST00000425280 TANKQ92844 425 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 ELF4Q99607 663 aaPredicted RBP24.87■■□□□ 1.57
LDB1-202ENST00000425280 BCL2L10Q9HD36 194 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 SOHLH2Q9NX45 425 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 PLCL2Q9UPR0 1127 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 CLCA2Q9UQC9 943 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 ENPP4Q9Y6X5 453 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 J3KTA2 159 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 NUDT21O43809 227 aaKnown RBP24.87■■□□□ 1.57
LDB1-202ENST00000425280 NME6O75414 186 aaPredicted RBP24.87■■□□□ 1.57
LDB1-202ENST00000425280 DNAJB5O75953 348 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 GPR75O95800 540 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 LINGO3P0C6S8 592 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 CRISP3P54108 245 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 APOFQ13790 326 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 PMS2CLQ68D20 193 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 OR2L13Q8N349 312 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 ZNF786Q8N393 782 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 ZNF555Q8NEP9 628 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 BBS10Q8TAM1 723 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 ACTRT3Q9BYD9 372 aa24.87■■□□□ 1.57
LDB1-202ENST00000425280 A0A0A6YYC8 382 aaPredicted RBP24.86■■□□□ 1.57
LDB1-202ENST00000425280 I3L1I5 382 aaPredicted RBP24.86■■□□□ 1.57
LDB1-202ENST00000425280 TNFRSF11BO00300 401 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 CHST10O43529 356 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 KCNJ5P48544 419 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 KCNC4Q03721 635 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 ZNF628Q5EBL2 1059 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 GALNT5Q7Z7M9 940 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 TTC29Q8NA56 475 aaPredicted RBP24.86■■□□□ 1.57
LDB1-202ENST00000425280 MS4A4EQ96PG1 132 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 CD180Q99467 661 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 CLK4Q9HAZ1 481 aaKnown RBP24.86■■□□□ 1.57
LDB1-202ENST00000425280 PDE7BQ9NP56 450 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 CCDC88CQ9P219 2028 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 SEC14L3Q9UDX4 400 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 KLHL3Q9UH77 587 aa24.86■■□□□ 1.57
LDB1-202ENST00000425280 IGHV1OR21-1A0A087WYE8 117 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 FOXS1O43638 330 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 ASNA1O43681 348 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 SERPINB7O75635 380 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 IFNW1P05000 195 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 SPIBQ01892 262 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 SIGLEC14Q08ET2 396 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 GNA13Q14344 377 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 RNF220Q5VTB9 566 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 FAHD1Q6P587 224 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 APLFQ8IW19 511 aaPredicted RBP24.85■■□□□ 1.57
LDB1-202ENST00000425280 SIMC1Q8NDZ2 872 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 OR4C15Q8NGM1 316 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 PROX1Q92786 737 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 AHCYL2Q96HN2 611 aaKnown RBP24.85■■□□□ 1.57
LDB1-202ENST00000425280 PIP5K1AQ99755 562 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 CHRNA10Q9GZZ6 450 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 PTGFRNQ9P2B2 879 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 CLPTM1O96005 669 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 ATP1B1P05026 303 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 GNSP15586 552 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 NDUFA9Q16795 377 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 MFSD12Q6NUT3 480 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 KRT73Q86Y46 540 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 TSPAN14Q8NG11 270 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 RASSF5Q8WWW0 418 aa24.85■■□□□ 1.57
LDB1-202ENST00000425280 ANKRD9Q96BM1 317 aaPredicted RBP24.85■■□□□ 1.57
LDB1-202ENST00000425280 MYF5P13349 255 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 ATP6V1B1P15313 513 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 POLR2IP36954 125 aaKnown RBP24.84■■□□□ 1.57
LDB1-202ENST00000425280 ARRB1P49407 418 aaPredicted RBP24.84■■□□□ 1.57
LDB1-202ENST00000425280 CDH12P55289 794 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 FHL5Q5TD97 284 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 WDR53Q7Z5U6 358 aaPredicted RBP24.84■■□□□ 1.57
LDB1-202ENST00000425280 ZNF605Q86T29 641 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 PIK3C3Q8NEB9 887 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 FAM32AQ9Y421 112 aaKnown RBP24.84■■□□□ 1.57
LDB1-202ENST00000425280 TNRC6BQ9UPQ9 1833 aaKnown RBP24.84■■□□□ 1.57
LDB1-202ENST00000425280 ZBTB11O95625 1053 aaPredicted RBP24.84■■□□□ 1.57
LDB1-202ENST00000425280 GLB1P16278 677 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 RHCEP18577 417 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 KCTD21Q4G0X4 260 aa24.84■■□□□ 1.57
LDB1-202ENST00000425280 GPAT3Q53EU6 434 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms