RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 EBPQ15125 230 aaKnown RBP17.11■□□□□ 0.33
HDAC6-205ENST00000423941 LTB4RQ15722 352 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 TRMT12Q53H54 448 aaKnown RBP17.11■□□□□ 0.33
HDAC6-205ENST00000423941 PIGGQ5H8A4 983 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 RNF111Q6ZNA4 994 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 C16orf47Q6ZP98 133 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-205ENST00000423941 CAMKMTQ7Z624 323 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 SIMC1Q8NDZ2 872 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 ADCY4Q8NFM4 1077 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 CDC26Q8NHZ8 85 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 THAP3Q8WTV1 239 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-205ENST00000423941 ADIPOR1Q96A54 375 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 TP53INP1Q96A56 240 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 PPP1R36Q96LQ0 422 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 AMDHD1Q96NU7 426 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 BARD1Q99728 777 aaKnown RBP17.11■□□□□ 0.33
HDAC6-205ENST00000423941 C1orf50Q9BV19 199 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 MFRPQ9BY79 579 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 OR10A5Q9H207 317 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 GLIPR2Q9H4G4 154 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 GIMAP4Q9NUV9 329 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 MARCOQ9UEW3 520 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-205ENST00000423941 ENTPD4Q9Y227 616 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 EIF3LQ9Y262 564 aaKnown RBP17.11■□□□□ 0.33
HDAC6-205ENST00000423941 PCDHGA10Q9Y5H3 936 aa17.11■□□□□ 0.33
HDAC6-205ENST00000423941 A0A087WV62 115 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 TRAV17A0A0B4J275 112 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 FCHO1O14526 889 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 SCAMP2O15127 329 aaKnown RBP17.1■□□□□ 0.33
HDAC6-205ENST00000423941 AKAP10O43572 662 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 OR2J2O76002 312 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 SLITRK5O94991 958 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 TGDSO95455 350 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 NADKO95544 446 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-205ENST00000423941 KITP10721 976 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 RPL3P39023 403 aaKnown RBP17.1■□□□□ 0.33
HDAC6-205ENST00000423941 DIO3P55073 304 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 ZNF169Q14929 603 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-205ENST00000423941 LYPD8Q6UX82 237 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 R3HCC1LQ7Z5L2 792 aaKnown RBP17.1■□□□□ 0.33
HDAC6-205ENST00000423941 SLC15A4Q8N697 577 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 C17orf47Q8NEP4 570 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 OR9A2Q8NGT5 310 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 CLHC1Q8NHS4 586 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 ACTRT2Q8TDY3 377 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 GFM2Q969S9 779 aaKnown RBP17.1■□□□□ 0.33
HDAC6-205ENST00000423941 PPCDCQ96CD2 204 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 SIGLEC12Q96PQ1 595 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 BBS4Q96RK4 519 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 RASL10BQ96S79 203 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 UTP23Q9BRU9 249 aaKnown RBP17.1■□□□□ 0.33
HDAC6-205ENST00000423941 WWTR1Q9GZV5 400 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 WDR55Q9H6Y2 383 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-205ENST00000423941 LIN28AQ9H9Z2 209 aaKnown RBP17.1■□□□□ 0.33
HDAC6-205ENST00000423941 ACSS1Q9NUB1 689 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-205ENST00000423941 ABI3Q9P2A4 366 aa17.1■□□□□ 0.33
HDAC6-205ENST00000423941 LRATO95237 230 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 ALDOCP09972 364 aaKnown RBP17.09■□□□□ 0.33
HDAC6-205ENST00000423941 EPHA3P29320 983 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 PTGER1P34995 402 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 EMDP50402 254 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 MLC1Q15049 377 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 ANKRD26P1Q6NSI1 321 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 EPGNQ6UW88 154 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 SPATA19Q7Z5L4 167 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 GPALPP1Q8IXQ4 340 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 FAM9CQ8IZT9 166 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 C16orf52Q8NHV5 167 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 DYDC1Q8WWB3 177 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 SCMH1Q96GD3 660 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 NTMQ9P121 344 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 MAPRE3Q9UPY8 281 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 USH1CQ9Y6N9 552 aa17.09■□□□□ 0.33
HDAC6-205ENST00000423941 WWP2O00308 870 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 PRAMEF2O60811 474 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 BCAS2O75934 225 aaPredicted RBP17.08■□□□□ 0.32
HDAC6-205ENST00000423941 PSMG1O95456 288 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 F10P00742 488 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 CYB561P49447 251 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 SSR4P51571 173 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 MRPS35P82673 323 aaKnown RBP17.08■□□□□ 0.32
HDAC6-205ENST00000423941 EXOSC7Q15024 291 aaKnown RBP17.08■□□□□ 0.32
HDAC6-205ENST00000423941 SLC9B1Q4ZJI4 515 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 COLEC12Q5KU26 742 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 C6orf163Q5TEZ5 329 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 SLC29A4Q7RTT9 530 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 ARFGAP2Q8N6H7 521 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 KRTCAP2Q8N6L1 136 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 NATD1Q8N6N6 113 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 OR7G2Q8NG99 324 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 OR7A2PQ8NGA2 310 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 BRINP2Q9C0B6 783 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 EPN3Q9H201 632 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 AIG1Q9NVV5 245 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 SH3BP4Q9P0V3 963 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 LRFN1Q9P244 771 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 C19orf53Q9UNZ5 99 aaPredicted RBP17.08■□□□□ 0.32
HDAC6-205ENST00000423941 CFL2Q9Y281 166 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 EML6Q6ZMW3 1958 aa17.08■□□□□ 0.32
HDAC6-205ENST00000423941 EXPH5Q8NEV8 1989 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms