RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 H1F0P07305 194 aaKnown RBP10.33□□□□□ -0.75
DDX56-203ENST00000421223 DBTP11182 482 aaKnown RBP10.33□□□□□ -0.75
DDX56-203ENST00000421223 CHMP24386 653 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 OPRL1P41146 370 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 TNFRSF4P43489 277 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 CRISP3P54108 245 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 MLLT1Q03111 559 aaPredicted RBP10.33□□□□□ -0.75
DDX56-203ENST00000421223 COMTD1Q86VU5 262 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 SIMC1Q8NDZ2 872 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 OR2L5Q8NG80 312 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 PPP1R14BQ96C90 147 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 PLEKHA8Q96JA3 519 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 RIPOR3Q96MK2 946 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 GPN2Q9H9Y4 310 aaPredicted RBP10.33□□□□□ -0.75
DDX56-203ENST00000421223 PRDM7Q9NQW5 492 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 STARD5Q9NSY2 213 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 GIMAP4Q9NUV9 329 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 FAIMQ9NVQ4 179 aa10.33□□□□□ -0.75
DDX56-203ENST00000421223 MDC1Q14676 2089 aaKnown RBP10.33□□□□□ -0.76
DDX56-203ENST00000421223 MAN2B1O00754 1011 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 UGT2B17O75795 530 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 APOL3O95236 402 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 RECKO95980 971 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 JUNDP17535 347 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 NDUFV2P19404 249 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 CSNK2A2P19784 350 aaPredicted RBP10.33□□□□□ -0.76
DDX56-203ENST00000421223 LIPAP38571 399 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 AVPR1BP47901 424 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 TIGD6Q17RP2 521 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 PRSS48Q7RTY5 328 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 KIAA1958Q8N8K9 716 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 RHOXF1Q8NHV9 184 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 BORCS5Q969J3 196 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 PHOX2BQ99453 314 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 POLR2J3Q9H1A7 115 aaKnown RBP10.33□□□□□ -0.76
DDX56-203ENST00000421223 RNF167Q9H6Y7 350 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 CCNB1IP1Q9NPC3 277 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 THSD1Q9NS62 852 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 TBCCD1Q9NVR7 557 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 TVP23BQ9NYZ1 205 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 ZNF780BQ9Y6R6 833 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 HSPE1-MOB4S4R3N1 261 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 NUP210Q8TEM1 1887 aaPredicted RBP10.33□□□□□ -0.76
DDX56-203ENST00000421223 GPR89AB7ZAQ6 455 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 BOLA2-SMG1P6H3BVE0 249 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 PDE9AO76083 593 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 GPR89BP0CG08 455 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 CKMT1AP12532 417 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 TYRP1P17643 537 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 DDX5P17844 614 aaKnown RBP10.33□□□□□ -0.76
DDX56-203ENST00000421223 CRISP1P54107 249 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 RPS3AP61247 264 aaKnown RBP10.33□□□□□ -0.76
DDX56-203ENST00000421223 ALDH6A1Q02252 535 aaKnown RBP10.33□□□□□ -0.76
DDX56-203ENST00000421223 HYAL2Q12891 473 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 ENPP2Q13822 863 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 MOGQ16653 247 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 FRMPD2BQ6IN97 320 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 CCDC80Q76M96 950 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 B3GNT7Q8NFL0 401 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 TTLQ8NG68 377 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 MYDGFQ969H8 173 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 ZHX1-C8orf76Q96EF9 292 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 BMFQ96LC9 184 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 WDR92Q96MX6 357 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 CHCHD6Q9BRQ6 235 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 RAB11FIP5Q9BXF6 653 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 SLC7A5P2Q9GIP4 190 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 LMAN2LQ9H0V9 348 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 TCEAL2Q9H3H9 227 aaPredicted RBP10.33□□□□□ -0.76
DDX56-203ENST00000421223 MKLN1Q9UL63 735 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 DOLKQ9UPQ8 538 aa10.33□□□□□ -0.76
DDX56-203ENST00000421223 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.33□□□□□ -0.76
DDX56-203ENST00000421223 PNMA8CA0A1B0GUJ8 204 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.32□□□□□ -0.76
DDX56-203ENST00000421223 EFCAB9A8MZ26 197 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 CHRM4P08173 479 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 DRD2P14416 443 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 MPIP34949 423 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 TPMTP51580 245 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 CXCR4P61073 352 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 DMPKQ09013 629 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 MAPK11Q15759 364 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 C16orf62Q7Z3J2 963 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 ANKRD13BQ86YJ7 626 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 DEPDC4Q8N2C3 294 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 DNAJC22Q8N4W6 341 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 NUP43Q8NFH3 380 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 OR6T1Q8NGN1 323 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 SLC7A13Q8TCU3 470 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 ZNF566Q969W8 418 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 LGALS12Q96DT0 336 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 SPOCK3Q9BQ16 436 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 GABARAPL3Q9BY60 117 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 UCK2Q9BZX2 261 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 ZBTB20Q9HC78 741 aaPredicted RBP10.32□□□□□ -0.76
DDX56-203ENST00000421223 EXOSC4Q9NPD3 245 aaKnown RBP10.32□□□□□ -0.76
DDX56-203ENST00000421223 SNX7Q9UNH6 387 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 CLCA2Q9UQC9 943 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 ASB4Q9Y574 426 aa10.32□□□□□ -0.76
DDX56-203ENST00000421223 CPSF4LA6NMK7 179 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms