RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SEPHS1P49903 392 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 HSD11B2P80365 405 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 PRR5P85299 388 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 FUT5Q11128 374 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 NDUFA9Q16795 377 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 ZNF628Q5EBL2 1059 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 TCTE1Q5JU00 501 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 GUSBP11Q6P575 273 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 BHLHB9Q6PI77 547 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 FAM111BQ6SJ93 734 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 TTC29Q8NA56 475 aaPredicted RBP19.67■□□□□ 0.74
GPC1-202ENST00000420138 TANKQ92844 425 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 COL26A1Q96A83 441 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 OTUB1Q96FW1 271 aaPredicted RBP19.67■□□□□ 0.74
GPC1-202ENST00000420138 SLC41A2Q96JW4 573 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 NUDT22Q9BRQ3 303 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 YIPF4Q9BSR8 244 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 GMEB2Q9UKD1 530 aa19.67■□□□□ 0.74
GPC1-202ENST00000420138 TMEM184BQ9Y519 407 aaPredicted RBP19.67■□□□□ 0.74
GPC1-202ENST00000420138 MYOCOSA0A1B0GUC4 107 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 PRR33A8MZF0 331 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 NME6O75414 186 aaPredicted RBP19.66■□□□□ 0.74
GPC1-202ENST00000420138 RECKO95980 971 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 ATP1B1P05026 303 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 SYPP08247 313 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 MPLP40238 635 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 RPL5P46777 297 aaKnown RBP19.66■□□□□ 0.74
GPC1-202ENST00000420138 PPP1R8Q12972 351 aaKnown RBP19.66■□□□□ 0.74
GPC1-202ENST00000420138 SYPL1Q16563 259 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 PERM1Q5SV97 790 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 ISLR2Q6UXK2 745 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 TMPRSS9Q7Z410 1059 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 PRSS42Q7Z5A4 293 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 PATL1Q86TB9 770 aaKnown RBP19.66■□□□□ 0.74
GPC1-202ENST00000420138 OR2L13Q8N349 312 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 D2HGDHQ8N465 521 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 FAM181AQ8N9Y4 354 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 LOXL4Q96JB6 756 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 ARRDC1-AS1Q9H2J1 176 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 C3orf14Q9HBI5 128 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 THUMPD1Q9NXG2 353 aaKnown RBP19.66■□□□□ 0.74
GPC1-202ENST00000420138 NDUFA13Q9P0J0 144 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 HCN3Q9P1Z3 774 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 RAB23Q9ULC3 237 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 PADI2Q9Y2J8 665 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 KCNE3Q9Y6H6 103 aa19.66■□□□□ 0.74
GPC1-202ENST00000420138 DIRAS1O95057 198 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 TNFRSF1BP20333 461 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 DCTP40126 519 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 KHKP50053 298 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 NUBP1P53384 320 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 NR0B2Q15466 257 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 SLC36A3Q495N2 470 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 FHL5Q5TD97 284 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 SLC44A2Q8IWA5 706 aaPredicted RBP19.65■□□□□ 0.74
GPC1-202ENST00000420138 HS3ST5Q8IZT8 346 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 XAGE5Q8WWM1 108 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 RUBCNLQ9H714 662 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 SMPD3Q9NY59 655 aaPredicted RBP19.65■□□□□ 0.74
GPC1-202ENST00000420138 MFN2O95140 757 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 H6PDO95479 791 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 MYF6P23409 242 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 GCGRP47871 477 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 ARSFP54793 590 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 EMP3P54852 163 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 MAT1AQ00266 395 aaKnown RBP19.65■□□□□ 0.74
GPC1-202ENST00000420138 MGAT2Q10469 447 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 SQSTM1Q13501 440 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 APOFQ13790 326 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 SNAP47Q5SQN1 464 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 OR2T5Q6IEZ7 315 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 ZC3H14Q6PJT7 736 aaKnown RBP19.65■□□□□ 0.74
GPC1-202ENST00000420138 LGI4Q8N135 537 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 SMYD1Q8NB12 490 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 OR2T29Q8NH02 315 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 MAGEE2Q8TD90 523 aaPredicted RBP19.65■□□□□ 0.74
GPC1-202ENST00000420138 GTPBP2Q9BX10 602 aaKnown RBP19.65■□□□□ 0.74
GPC1-202ENST00000420138 SMOC1Q9H4F8 434 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 P2RX2Q9UBL9 471 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 TRPC4Q9UBN4 977 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 CLCA2Q9UQC9 943 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 MYRFQ9Y2G1 1151 aa19.65■□□□□ 0.74
GPC1-202ENST00000420138 ZNF318Q5VUA4 2279 aa19.64■□□□□ 0.74
GPC1-202ENST00000420138 SMIM31A0A1B0GVY4 71 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 EME2A4GXA9 379 aaPredicted RBP19.64■□□□□ 0.73
GPC1-202ENST00000420138 G3V2T6 193 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 GNGT2O14610 69 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 TFAP2AP05549 437 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 FOLR1P15328 257 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 CD247P20963 164 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 DUSP7Q16829 419 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 SYT16Q17RD7 645 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 TRMT12Q53H54 448 aaKnown RBP19.64■□□□□ 0.73
GPC1-202ENST00000420138 OTUD3Q5T2D3 398 aaPredicted RBP19.64■□□□□ 0.73
GPC1-202ENST00000420138 NIPAL1Q6NVV3 410 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 ZNF574Q6ZN55 896 aaPredicted RBP19.64■□□□□ 0.73
GPC1-202ENST00000420138 ZDHHC13Q8IUH4 622 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 METTL25Q8N6Q8 603 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 OR6C4Q8NGE1 309 aa19.64■□□□□ 0.73
GPC1-202ENST00000420138 APOBEC4Q8WW27 367 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms