RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 A0A1W2PPM1 405 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 BCKDKO14874 412 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 ULK1O75385 1050 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 GSTA1P08263 222 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 CHN1P15882 459 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 NT5EP21589 574 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 TRA2BP62995 288 aaKnown RBP16.43■□□□□ 0.22
CPNE1-210ENST00000416778 RASA2Q15283 850 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 PRICKLE4Q2TBC4 344 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 PRAMEF20Q5VT98 475 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 RTL6Q6ICC9 239 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 FAM111BQ6SJ93 734 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 LRRC25Q8N386 305 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-210ENST00000416778 C1orf52Q8N6N3 182 aaKnown RBP16.43■□□□□ 0.22
CPNE1-210ENST00000416778 FAM13CQ8NE31 585 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 OR5M3Q8NGP4 307 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 METTL6Q8TCB7 284 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 RND1Q92730 232 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 NTNG2Q96CW9 530 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 ZNF681Q96N22 645 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 TMEM237Q96Q45 408 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 SMC6Q96SB8 1091 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 ZNF382Q96SR6 550 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 HBEGFQ99075 208 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 TRIM8Q9BZR9 551 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 ACKR4Q9NPB9 350 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 TNFRSF10DQ9UBN6 386 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 DCDC2Q9UHG0 476 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 PSME2Q9UL46 239 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 RNF6Q9Y252 685 aa16.43■□□□□ 0.22
CPNE1-210ENST00000416778 LRRC3CA6NJW4 275 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 HCN1O60741 890 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 TRIM3O75382 744 aaPredicted RBP16.42■□□□□ 0.22
CPNE1-210ENST00000416778 KRT6AP02538 564 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 KRT6BP04259 564 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 ATP1B1P05026 303 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 HSD3B1P14060 373 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 CSNK2A2P19784 350 aaPredicted RBP16.42■□□□□ 0.22
CPNE1-210ENST00000416778 HSD3B2P26439 372 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 ACVR2AP27037 513 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 DEKP35659 375 aaKnown RBP16.42■□□□□ 0.22
CPNE1-210ENST00000416778 FEN1P39748 380 aaKnown RBP16.42■□□□□ 0.22
CPNE1-210ENST00000416778 KRT6CP48668 564 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 MAN2A2P49641 1150 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 NUP107P57740 925 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 FBXW4P57775 412 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 KCNJ2P63252 427 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 DUSP2Q05923 314 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 HLA-DQA1Q5Y7H0 255 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 ZNF585AQ6P3V2 769 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 GPRIN3Q6ZVF9 776 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 ACAD11Q709F0 780 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 SLC22A9Q8IVM8 553 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 LRRN4CLQ8ND94 238 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 C17orf47Q8NEP4 570 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 ASB5Q8WWX0 329 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 CTHRC1Q96CG8 243 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 L3HYPDHQ96EM0 354 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 TREX2Q9BQ50 279 aaPredicted RBP16.42■□□□□ 0.22
CPNE1-210ENST00000416778 UCK2Q9BZX2 261 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 LDAHQ9H6V9 325 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 PSMC3IPQ9P2W1 217 aaPredicted RBP16.42■□□□□ 0.22
CPNE1-210ENST00000416778 HEY2Q9UBP5 337 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 EMCNQ9ULC0 261 aa16.42■□□□□ 0.22
CPNE1-210ENST00000416778 TRGV5A0A0B4J1U4 118 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 ENO4A6NNW6 628 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 CAPN14A8MX76 684 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 FOXO6A8MYZ6 492 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 ERAL1O75616 437 aaKnown RBP16.41■□□□□ 0.22
CPNE1-210ENST00000416778 LRATO95237 230 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 RAE1P78406 368 aaKnown RBP16.41■□□□□ 0.22
CPNE1-210ENST00000416778 DUSP8Q13202 625 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 CCDC71Q8IV32 467 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-210ENST00000416778 CNPY4Q8N129 248 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 GBP7Q8N8V2 638 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-210ENST00000416778 EIF1ADQ8N9N8 165 aaKnown RBP16.41■□□□□ 0.22
CPNE1-210ENST00000416778 SIMC1Q8NDZ2 872 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 SPPL2AQ8TCT8 520 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 CNRIP1Q96F85 164 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-210ENST00000416778 SECISBP2Q96T21 854 aaKnown RBP16.41■□□□□ 0.22
CPNE1-210ENST00000416778 TTYH2Q9BSA4 534 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 ANGPTL4Q9BY76 406 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 QPCTLQ9NXS2 382 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 MAT2BQ9NZL9 334 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 SPRR3Q9UBC9 169 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 TBK1Q9UHD2 729 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 ACAD8Q9UKU7 415 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 BOKQ9UMX3 212 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-210ENST00000416778 DTX4Q9Y2E6 619 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 FAM215AQ9Y5M1 114 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 NINQ8N4C6 2090 aa16.41■□□□□ 0.22
CPNE1-210ENST00000416778 SERTM1A2A2V5 107 aa16.4■□□□□ 0.22
CPNE1-210ENST00000416778 GOLGA6L10A6NI86 522 aa16.4■□□□□ 0.22
CPNE1-210ENST00000416778 G3V2L1 256 aa16.4■□□□□ 0.22
CPNE1-210ENST00000416778 TP53I11O14683 189 aa16.4■□□□□ 0.22
CPNE1-210ENST00000416778 TOXO94900 526 aa16.4■□□□□ 0.22
CPNE1-210ENST00000416778 ABCB1P08183 1280 aaPredicted RBP16.4■□□□□ 0.22
CPNE1-210ENST00000416778 GLI4P10075 376 aa16.4■□□□□ 0.22
CPNE1-210ENST00000416778 ENDOUP21128 410 aaKnown RBP16.4■□□□□ 0.22
CPNE1-210ENST00000416778 GPX3P22352 226 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms