RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 KIF17Q9P2E2 1029 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 TRPC4Q9UBN4 977 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 PADI2Q9Y2J8 665 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 NAALAD2Q9Y3Q0 740 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 TLN1Q9Y490 2541 aaKnown RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 A0A1W2PPM1 405 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 TRBC2A0A5B9 178 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 SAP18O00422 153 aaKnown RBP4.59□□□□□ -1.67
VPS41-205ENST00000414632 MAP2K7O14733 419 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 STK16O75716 305 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 CDC123O75794 336 aaPredicted RBP4.59□□□□□ -1.67
VPS41-205ENST00000414632 PRSS23O95084 383 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 CELA2AP08217 269 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 ABHD2P08910 425 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 SNRPAP09012 282 aaKnown RBP4.59□□□□□ -1.67
VPS41-205ENST00000414632 SLC35G6P0C7Q6 338 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 C1GALT1C1LP0DN25 315 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 PCNAP12004 261 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 EGR1P18146 543 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 TSPAN8P19075 237 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 GNAZP19086 355 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 EPORP19235 508 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 CD22P20273 847 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 CNTFP26441 200 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 TNFRSF8P28908 595 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 HSD17B3P37058 310 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 ARL1P40616 181 aaPredicted RBP4.59□□□□□ -1.67
VPS41-205ENST00000414632 CASP2P42575 452 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 MAGEA12P43365 314 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 AVPR1BP47901 424 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 PTDSS1P48651 473 aaKnown RBP4.59□□□□□ -1.67
VPS41-205ENST00000414632 HNMTP50135 292 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 CCL11P51671 97 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 EFNA3P52797 238 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 WNT3P56703 355 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 KLC1Q07866 573 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 ILF2Q12905 390 aaKnown RBP4.59□□□□□ -1.67
VPS41-205ENST00000414632 CHIT1Q13231 466 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 DDX39BQ13838 428 aaKnown RBP4.59□□□□□ -1.67
VPS41-205ENST00000414632 DOC2AQ14183 400 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 RBBP7Q16576 425 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 PDK4Q16654 411 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 FAM83EQ2M2I3 478 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 DEFB134Q4QY38 66 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 TOR1AIP1Q5JTV8 583 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 ATG9BQ674R7 924 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 SULT1C3Q6IMI6 304 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 KLC3Q6P597 504 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 MED25Q71SY5 747 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 DOK3Q7L591 496 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 MRGPREQ86SM8 312 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 KRT73Q86Y46 540 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 RAB43Q86YS6 212 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 CCDC28AQ8IWP9 274 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 TCAIMQ8N3R3 496 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 TEX9Q8N6V9 391 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 PTGR2Q8N8N7 351 aaPredicted RBP4.59□□□□□ -1.67
VPS41-205ENST00000414632 AMER3Q8N944 861 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 CAMKVQ8NCB2 501 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 ABHD11Q8NFV4 315 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 OR4K1Q8NGD4 311 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 OR1N1Q8NGS0 311 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 OR2Y1Q8NGV0 311 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 STAG3L4Q8TBR4 150 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 ANKRD7Q92527 254 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 MIEF2Q96C03 454 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 TM4SF19Q96DZ7 209 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 PHF21BQ96EK2 531 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 AIF1LQ9BQI0 150 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 CPPED1Q9BRF8 314 aaPredicted RBP4.59□□□□□ -1.67
VPS41-205ENST00000414632 AICDAQ9GZX7 198 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 DRC3Q9H069 523 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 RHBGQ9H310 441 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 PELI2Q9HAT8 420 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 ANKHQ9HCJ1 492 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 PSMC3IPQ9P2W1 217 aaPredicted RBP4.59□□□□□ -1.67
VPS41-205ENST00000414632 OPTCQ9UBM4 332 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 PTBP2Q9UKA9 531 aaKnown RBP4.59□□□□□ -1.67
VPS41-205ENST00000414632 TP53TG5Q9Y2B4 290 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 ANGPTL3Q9Y5C1 460 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 KCNE2Q9Y6J6 123 aa4.59□□□□□ -1.67
VPS41-205ENST00000414632 UTP20O75691 2785 aaKnown RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 KCNE1BA0A087WTH5 132 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 IGHV3-20A0A0C4DH32 117 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 IQANK1A0A1B0GTG1 560 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 HMX3A6NHT5 357 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 VSTM2BA6NLU5 285 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 B9A039 149 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 K7EPI3 171 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 RTCAO00442 366 aaKnown RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 PEX12O00623 359 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 FCHO1O14526 889 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 TXNDC9O14530 226 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 SOCS6O14544 535 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 COQ9O75208 318 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 SMIM24O75264 130 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 IPO13O94829 963 aaKnown RBP4.58□□□□□ -1.68
VPS41-205ENST00000414632 HEXBP07686 556 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 ALOX12P18054 663 aa4.58□□□□□ -1.68
VPS41-205ENST00000414632 HRH2P25021 359 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms