RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ART5Q96L15 291 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 DUX3Q96PT4 197 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 APOOQ9BUR5 198 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 RAB11FIP5Q9BXF6 653 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 LRRCC1Q9C099 1032 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 SCRT2Q9NQ03 307 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 TAS2R16Q9NYV7 291 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 TBK1Q9UHD2 729 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 FZR1Q9UM11 496 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 GAB2Q9UQC2 676 aa4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 EXOGQ9Y2C4 368 aaKnown RBP4.02□□□□□ -1.77
HMGB3P31-201ENST00000413333 LOC105371242A0A075B767 164 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 A0A0J9YVX5 310 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 A0A1B0GUL7 405 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 PRR23AA6NEV1 266 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZNF724A8MTY0 619 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 MPHOSPH10O00566 681 aaKnown RBP4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 TFECO14948 347 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 MAPK13O15264 365 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 STK17BO94768 372 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 OR4F21O95013 312 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 MBD3O95983 291 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 GSTT2P0CG29 244 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 GSTT2BP0CG30 244 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 CFC1BP0CG36 223 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 CFC1P0CG37 223 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 MAT2AP31153 395 aaKnown RBP4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 SOX6P35712 828 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 HERVK_113P63132 956 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 ERVK-8P63133 956 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 NAAAQ02083 359 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 ENPP2Q13822 863 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 EMC2Q15006 297 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 HAGHQ16775 308 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 UPP1Q16831 310 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZSWIM7Q19AV6 140 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 SHROOM1Q2M3G4 852 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZNF699Q32M78 642 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 TMEM30BQ3MIR4 351 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 LRIT3Q3SXY7 679 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 UNC50Q53HI1 259 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 LUZP1Q86V48 1076 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 TBC1D21Q8IYX1 336 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 ARFGAP2Q8N6H7 521 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 CAPNS2Q96L46 248 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 RCHY1Q96PM5 261 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 WRAP53Q9BUR4 548 aaKnown RBP4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 ERVK-6Q9BXR3 956 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 UPF3AQ9H1J1 476 aaKnown RBP4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 LIME1Q9H400 295 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 ALG9Q9H6U8 611 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 NT5DC2Q9H857 520 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 NRN1Q9NPD7 142 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 THEGQ9P2T0 379 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 TUBGCP4Q9UGJ1 667 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 ATP6V1HQ9UI12 483 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 SNX6Q9UNH7 406 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 LRP12Q9Y561 859 aa4.01□□□□□ -1.77
HMGB3P31-201ENST00000413333 CUX2O14529 1486 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 IGHV3-38A0A0C4DH36 116 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 TRBV5-4A0A0C4DH59 114 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 A0A1B0GWJ7 208 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 IGLON5A6NGN9 336 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 EI24O14681 340 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 IDH1O75874 414 aaKnown RBP4□□□□□ -1.77
HMGB3P31-201ENST00000413333 GOT2P00505 430 aaKnown RBP4□□□□□ -1.77
HMGB3P31-201ENST00000413333 IGHDP01880 384 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 DPP4P27487 766 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 RFC2P35250 354 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 HTR5AP47898 357 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 SLC1A6P48664 564 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 NAPAP54920 295 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 TMEM50BP56557 158 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 ITPK1Q13572 414 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 EXOSC2Q13868 293 aaKnown RBP4□□□□□ -1.77
HMGB3P31-201ENST00000413333 NECTIN1Q15223 517 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 MOGAT2Q3SYC2 334 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 ACSF3Q4G176 576 aaPredicted RBP4□□□□□ -1.77
HMGB3P31-201ENST00000413333 TMEM41BQ5BJD5 291 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 GDPGP1Q6ZNW5 385 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 LPCAT2Q7L5N7 544 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 VPS36Q86VN1 386 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 STKLD1Q8NE28 680 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 OR10T2Q8NGX3 314 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 SPPL2AQ8TCT8 520 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 DNASE2BQ8WZ79 361 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 PINX1Q96BK5 328 aaKnown RBP4□□□□□ -1.77
HMGB3P31-201ENST00000413333 HPDLQ96IR7 371 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 AGAP4Q96P64 663 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 ERP44Q9BS26 406 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 BARHL1Q9BZE3 327 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 STRADBQ9C0K7 418 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 RPAP3Q9H6T3 665 aaPredicted RBP4□□□□□ -1.77
HMGB3P31-201ENST00000413333 KAT8Q9H7Z6 458 aaKnown RBP4□□□□□ -1.77
HMGB3P31-201ENST00000413333 WDR76Q9H967 626 aa4□□□□□ -1.77
HMGB3P31-201ENST00000413333 FARSBQ9NSD9 589 aaKnown RBP4□□□□□ -1.77
HMGB3P31-201ENST00000413333 IGLV7-46A0A075B6I9 117 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 MPTX1A8MV57 137 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 E9PMD0 336 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms