RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 NOSIPQ9Y314 301 aaKnown RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PCDHGB2Q9Y5G2 931 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 UNC13CQ8NB66 2214 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 A0A087WV62 115 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 A0A0A6YYC8 382 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PRAMEF27A3QJZ7 478 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 I3L1I5 382 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CASC3O15234 703 aaKnown RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CLOCKO15516 846 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 LDLRP01130 860 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 RNH1P13489 461 aaKnown RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PORP16435 677 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PPP2R1BP30154 601 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 XKP51811 444 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CASP9P55211 416 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 SELENOWP63302 87 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 KCNJ10P78508 379 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PRR5P85299 388 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 KCNAB1Q14722 419 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 TAF11Q15544 211 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 LTB4RQ15722 352 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 LRRC36Q1X8D7 754 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 GRAMD1BQ3KR37 738 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 AMZ1Q400G9 498 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 SPDYE7PQ495Y7 208 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CYBRD1Q53TN4 286 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PRAMEF8Q5VWM4 474 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PRAMEF7Q5VXH5 474 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 REEP3Q6NUK4 255 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 NCCRP1Q6ZVX7 275 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 EID2Q8N6I1 236 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 TTC29Q8NA56 475 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 KNL1Q8NG31 2342 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 OR4D9Q8NGE8 314 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 HOXB13Q92826 284 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PPWD1Q96BP3 646 aaKnown RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 TAMM41Q96BW9 452 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CTHRC1Q96CG8 243 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF501Q96CX3 271 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 HSH2DQ96JZ2 352 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF597Q96LX8 424 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 OR51I1Q9H343 314 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 C3orf14Q9HBI5 128 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 TMEM165Q9HC07 324 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF304Q9HCX3 659 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 IL1RAPQ9NPH3 570 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PTGFRNQ9P2B2 879 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 DNAJB9Q9UBS3 223 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 KLHL3Q9UH77 587 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CLDN16Q9Y5I7 305 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 V9GYQ6 96 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ASXL3Q9C0F0 2248 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 FAM149AA5PLN7 773 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 FAM227AF5H4B4 570 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 TPST1O60507 370 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 DEAF1O75398 565 aaPredicted RBP5.17□□□□□ -1.58
EPHA4-202ENST00000409854 CPNE6O95741 557 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 HMGN2P05204 90 aaKnown RBP5.17□□□□□ -1.58
EPHA4-202ENST00000409854 HNRNPCP07910 306 aaKnown RBP eCLIP5.17□□□□□ -1.58
EPHA4-202ENST00000409854 MATN1P21941 496 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 MPLP40238 635 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 MC3RP41968 323 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 PRIM2P49643 509 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 CLCN2P51788 898 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 NUBP1P53384 320 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 RPS26P62854 115 aaKnown RBP5.17□□□□□ -1.58
EPHA4-202ENST00000409854 MGAT2Q10469 447 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 FUT5Q11128 374 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 TP53BP2Q13625 1128 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 PRICKLE4Q2TBC4 344 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 TMTC4Q5T4D3 741 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 FAM111BQ6SJ93 734 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 GALNT10Q86SR1 603 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 PATL1Q86TB9 770 aaKnown RBP5.17□□□□□ -1.58
EPHA4-202ENST00000409854 LURAP1LQ8IV03 231 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF595Q8IYB9 648 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 ARL6IP6Q8N6S5 226 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 NUP43Q8NFH3 380 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 OR7G2Q8NG99 324 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 OR2I1PQ8NGU4 316 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 OR1L3Q8NH93 324 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 SLC38A5Q8WUX1 472 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 EME1Q96AY2 570 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 C7orf34Q96L11 122 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 MS4A4EQ96PG1 132 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 DOHHQ9BU89 302 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 BDH2Q9BUT1 245 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 C9orf16Q9BUW7 83 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 LRRN3Q9H3W5 708 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 COQ10BQ9H8M1 238 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 ADPRHL2Q9NX46 363 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 PADI2Q9Y2J8 665 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 LRCH1Q9Y2L9 728 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 TMEM184BQ9Y519 407 aaPredicted RBP5.17□□□□□ -1.58
EPHA4-202ENST00000409854 A6NHS1 94 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 TMEM150CB9EJG8 249 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 SOCS2O14508 198 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 SUV39H1O43463 412 aa5.17□□□□□ -1.58
EPHA4-202ENST00000409854 PLOD3O60568 738 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms