RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 USP22Q9UPT9 525 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 RGPD1P0DJD0 1748 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 PRAMEF2O60811 474 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 PTHP01270 115 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 PRNPP04156 253 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 MRPL3P09001 348 aaKnown RBP16.87■□□□□ 0.29
SMPD4-202ENST00000409031 HTR3AP46098 478 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 KCNC1P48547 511 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 OR2AP1Q8NGE2 309 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 OR56B4Q8NH76 319 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 ANGPTL6Q8NI99 470 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMPD4-202ENST00000409031 THSD1Q9NS62 852 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 RBM7Q9Y580 266 aaKnown RBP16.87■□□□□ 0.29
SMPD4-202ENST00000409031 A0A1W2PPK0 400 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 LRRC69Q6ZNQ3 347 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 RETREG1Q9H6L5 497 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 ARNT2Q9HBZ2 717 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 NAALAD2Q9Y3Q0 740 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 NEDD8-MDP1E9PL57 170 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 VSX2P58304 361 aaPredicted RBP16.87■□□□□ 0.29
SMPD4-202ENST00000409031 ACTA2P62736 377 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 ACTG2P63267 376 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 OPCMLQ14982 345 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 TBPL2Q6SJ96 375 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 SVBPQ8N300 66 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 FCRL1Q96LA6 429 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 FYTTD1Q96QD9 318 aaKnown RBP16.87■□□□□ 0.29
SMPD4-202ENST00000409031 CLMPQ9H6B4 373 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 WDR45Q9Y484 360 aa16.87■□□□□ 0.29
SMPD4-202ENST00000409031 BORCS7-ASMTA0A0B4J1R7 106 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 TPPPO94811 219 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 HLA-DMAP28067 261 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 PTPN6P29350 595 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 WDR5P61964 334 aaKnown RBP16.86■□□□□ 0.29
SMPD4-202ENST00000409031 NADSYN1Q6IA69 706 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 OR7G3Q8NG95 312 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 ZNF558Q96NG5 402 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 TRBV2A0A0J9YWF9 115 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 PIM1P11309 404 aaPredicted RBP16.86■□□□□ 0.29
SMPD4-202ENST00000409031 BDKRB1P46663 353 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 MRPS10P82664 201 aaKnown RBP16.86■□□□□ 0.29
SMPD4-202ENST00000409031 MOAP1Q96BY2 351 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 NECAB3Q96P71 396 aaPredicted RBP16.86■□□□□ 0.29
SMPD4-202ENST00000409031 GSX2Q9BZM3 304 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 SNAPINO95295 136 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 SCG5P05408 212 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 DBPQ10586 325 aaPredicted RBP16.86■□□□□ 0.29
SMPD4-202ENST00000409031 DOC2AQ14183 400 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 KRBOX4Q5JUW0 171 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 KDELC1Q6UW63 502 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 ZNF783Q6ZMS7 281 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 NT5C3BQ969T7 300 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 C5orf34Q96MH7 638 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 EMC7Q9NPA0 242 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 NALCNQ8IZF0 1738 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 M0R129 80 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 SULT1C2O00338 296 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 OR12D1P0DN82 309 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 HRH2P25021 359 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 CCND3P30281 292 aaPredicted RBP16.86■□□□□ 0.29
SMPD4-202ENST00000409031 GLT8D1Q68CQ7 371 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 C6orf120Q7Z4R8 191 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 IQCF1Q8N6M8 205 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 GRHL3Q8TE85 626 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 APIPQ96GX9 242 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 DUSP21Q9H596 190 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 NUMBLQ9Y6R0 609 aa16.86■□□□□ 0.29
SMPD4-202ENST00000409031 NUDT7P0C024 238 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 SOX2P48431 317 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 P2RX3P56373 397 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 UNC5DQ6UXZ4 953 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 MFSD8Q8NHS3 518 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 CD200R1Q8TD46 325 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 WRAP53Q9BUR4 548 aaKnown RBP16.85■□□□□ 0.29
SMPD4-202ENST00000409031 RAB11FIP5Q9BXF6 653 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 GSKIPQ9P0R6 139 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 LIPT1Q9Y234 373 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 PEX10O60683 326 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 PFKMP08237 780 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 SMPD1P17405 629 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 FXYD6P3P58550 94 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 CARD16Q5EG05 197 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 RAB41Q5JT25 222 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 AMZ2Q86W34 360 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 SUN3Q8TAQ9 357 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 SMPDL3AQ92484 453 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 OTUB2Q96DC9 234 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 RBM18Q96H35 190 aaKnown RBP16.85■□□□□ 0.29
SMPD4-202ENST00000409031 OR2AG1Q9H205 316 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 ASF1BQ9NVP2 202 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 LRRC72A6NJI9 287 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 ARPC1BO15143 372 aaKnown RBP16.85■□□□□ 0.29
SMPD4-202ENST00000409031 MUSKO15146 869 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 ERI3O43414 337 aaKnown RBP16.85■□□□□ 0.29
SMPD4-202ENST00000409031 SDC1P18827 310 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 HOXD11P31277 338 aaPredicted RBP16.85■□□□□ 0.29
SMPD4-202ENST00000409031 ACTBP60709 375 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 ACTG1P63261 375 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 ABCA11PQ4W5N1 156 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms