RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 KCNJ10P78508 379 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 TGM3Q08188 693 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 CDK5R2Q13319 367 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 GNA13Q14344 377 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 MLC1Q15049 377 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 NEDD8Q15843 81 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.19□□□□□ -0.466e-15■□□□□ 9.2
SMARCB1-203ENST00000407082 GPR107Q5VW38 600 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 ANKRD26P1Q6NSI1 321 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 REEP3Q6NUK4 255 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 FAHD1Q6P587 224 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 BHLHB9Q6PI77 547 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 FAM83HQ6ZRV2 1179 aaPredicted RBP12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 USP53Q70EK8 1073 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 ZNF551Q7Z340 670 aaPredicted RBP12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 NRROSQ86YC3 692 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 SPARTQ8N0X7 666 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 SDR16C5Q8N3Y7 309 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 OR2L8Q8NGY9 312 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 OR4C6Q8NH72 309 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 WDR48Q8TAF3 677 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 SLC46A1Q96NT5 459 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 GSDMCQ9BYG8 508 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 SOX17Q9H6I2 414 aaPredicted RBP12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 EPS8L2Q9H6S3 715 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 GPN2Q9H9Y4 310 aaPredicted RBP12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 FANCEQ9HB96 536 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 C1GALT1Q9NS00 363 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 ACSS1Q9NUB1 689 aaPredicted RBP12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 TMEM184CQ9NVA4 438 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 ANKMY1Q9P2S6 941 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 CIDEBQ9UHD4 219 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 TAC3Q9UHF0 121 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 ABCG2Q9UNQ0 655 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 KCNK6Q9Y257 313 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 POFUT2Q9Y2G5 429 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 MAGED1Q9Y5V3 778 aaPredicted RBP12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 COLEC10Q9Y6Z7 277 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 U3KQV3 271 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 AHCTF1Q8WYP5 2266 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 LRP4O75096 1905 aa12.19□□□□□ -0.46
SMARCB1-203ENST00000407082 TRBC2A0A5B9 178 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 CPED1A4D0V7 1026 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 LMO7DNF2Z398 122 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 hCG_2039718K7EN88 272 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 TERTO14746 1132 aaKnown RBP12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 YY2O15391 372 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 SH3BGRLO75368 114 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 ALPPL2P10696 532 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 CKMT1AP12532 417 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 PRKACGP22612 351 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 SOAT1P35610 550 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 ACTR1BP42025 376 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 TSFMP43897 325 aaKnown RBP12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 RAB28P51157 221 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 DAPP51397 102 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 DUSP3P51452 185 aaPredicted RBP12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 CLCNKAP51800 687 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 ACTR1AP61163 376 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 VLDLRP98155 873 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 IL1RL1Q01638 556 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 PRDX1Q06830 199 aaKnown RBP12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 NPRL3Q12980 569 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 MEP1AQ16819 746 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 ISXQ2M1V0 245 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 DEFB133Q30KQ1 61 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 ZNF385BQ569K4 471 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 LINC00299Q6ZSB3 139 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 TMEM179BQ7Z7N9 219 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 CYP4Z1Q86W10 505 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 C10orf111Q8N326 155 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 FAM46DQ8NEK8 389 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 FCGR1BQ92637 280 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 EXTL1Q92935 676 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 MOAP1Q96BY2 351 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 NEURL3Q96EH8 262 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 C7orf34Q96L11 122 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 C12orf66Q96MD2 445 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 CCNL2Q96S94 520 aaPredicted RBP12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 ZNF607Q96SK3 696 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 PITX2Q99697 317 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 PSD2Q9BQI7 771 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 SPATA5L1Q9BVQ7 753 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 OSGEPL1Q9H4B0 414 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 EHD3Q9NZN3 535 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 NDRG4Q9ULP0 352 aaKnown RBP12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 NAALAD2Q9Y3Q0 740 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 TEX15Q9BXT5 2789 aa12.18□□□□□ -0.46
SMARCB1-203ENST00000407082 COL12A1Q99715 3063 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 ARRDC5A6NEK1 342 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 TRIM64BA6NI03 449 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 ZNF99A8MXY4 864 aaPredicted RBP12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 NDUFS4O43181 175 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 MPZL2O60487 215 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 TNFSF15O95150 251 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 BCL10O95999 233 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 RHCEP18577 417 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 TPP2P29144 1249 aaPredicted RBP12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 RRM2P31350 389 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 AHRP35869 848 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms