RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 NUDT7P0C024 238 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 FASP25445 335 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 KDELR2P33947 212 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 MAPK10P53779 464 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 CDK6Q00534 326 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 DUSP2Q05923 314 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 SCARB2Q14108 478 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 ELOAQ14241 798 aaKnown RBP19.7■□□□□ 0.74
TPM1-208ENST00000404484 LRRC23Q53EV4 343 aaPredicted RBP19.7■□□□□ 0.74
TPM1-208ENST00000404484 TMEM107Q6UX40 140 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 UNQ6494/PRO21346Q6UXR6 183 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 CACTIN-AS1Q8N1I8 211 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 FBXO30Q8TB52 745 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 NRG4Q8WWG1 115 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 ZNF501Q96CX3 271 aaPredicted RBP19.7■□□□□ 0.74
TPM1-208ENST00000404484 A4GALTQ9NPC4 353 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 PTGFRNQ9P2B2 879 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 SRPK3Q9UPE1 567 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 CELSR3Q9NYQ7 3312 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 PLOD2O00469 737 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 FGF17O60258 216 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 IFNA14P01570 189 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 ATP1B1P05026 303 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 TRA2AQ13595 282 aaKnown RBP eCLIP19.7■□□□□ 0.74
TPM1-208ENST00000404484 METTL25Q8N6Q8 603 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 CCDC74BQ96LY2 380 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 SEPHS2Q99611 448 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 NTMQ9P121 344 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 DMXL2Q8TDJ6 3036 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 TRABD2BA6NFA1 517 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 FAM227AF5H4B4 570 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 DSCR3O14972 297 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 MC3RP41968 323 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 GCGRP47871 477 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 TTLL10Q6ZVT0 673 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 CCDC80Q76M96 950 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 TMPRSS9Q7Z410 1059 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 OR4N5Q8IXE1 308 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 LILRA2Q8N149 483 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 TMEM52Q8NDY8 209 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 C7orf57Q8NEG2 295 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 MIPOL1Q8TD10 442 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 LRTOMTQ8WZ04 291 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 MAL2Q969L2 176 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 COL26A1Q96A83 441 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 SLC47A1Q96FL8 570 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 PEX11GQ96HA9 241 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 PYURFQ96I23 114 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 TACO1Q9BSH4 297 aaKnown RBP19.69■□□□□ 0.74
TPM1-208ENST00000404484 DDX18Q9NVP1 670 aaKnown RBP19.69■□□□□ 0.74
TPM1-208ENST00000404484 ADPRHL2Q9NX46 363 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 NDOR1Q9UHB4 597 aa19.69■□□□□ 0.74
TPM1-208ENST00000404484 C5orf58C9J3I9 102 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 D6RAR5 112 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 NTN3O00634 580 aaPredicted RBP19.68■□□□□ 0.74
TPM1-208ENST00000404484 ZNF749O43361 778 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 PEX1O43933 1283 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 B4GALT2O60909 372 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 CTNSO60931 367 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 LDB3O75112 727 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 TIPRLO75663 272 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 PRKD3O94806 890 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 SLC35E2P0CK97 266 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 MATN1P21941 496 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 CASP9P55211 416 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 EEF1A2Q05639 463 aaKnown RBP19.68■□□□□ 0.74
TPM1-208ENST00000404484 BIKQ13323 160 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 GNA13Q14344 377 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 C16orf72Q14CZ0 275 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 OGFRL1Q5TC84 451 aaPredicted RBP19.68■□□□□ 0.74
TPM1-208ENST00000404484 TNFAIP8L2Q6P589 184 aaPredicted RBP19.68■□□□□ 0.74
TPM1-208ENST00000404484 EIF3MQ7L2H7 374 aaKnown RBP19.68■□□□□ 0.74
TPM1-208ENST00000404484 HORMAD2Q8N7B1 307 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 TMEM102Q8N9M5 508 aaPredicted RBP19.68■□□□□ 0.74
TPM1-208ENST00000404484 NUP43Q8NFH3 380 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 ADCY4Q8NFM4 1077 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 OR51Q1Q8NH59 317 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 NFKBIDQ8NI38 313 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 ZNF675Q8TD23 568 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 MAGED4Q96JG8 741 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 MS4A4EQ96PG1 132 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 CHID1Q9BWS9 393 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 KLHL4Q9C0H6 718 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 PRTFDC1Q9NRG1 225 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 P2RX2Q9UBL9 471 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 V9GYQ6 96 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 APC2O95996 2303 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 ACACAQ13085 2346 aa19.68■□□□□ 0.74
TPM1-208ENST00000404484 A0A087WV62 115 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 A0A1W2PS29 197 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 ALAS2P22557 587 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 PRKAG1P54619 331 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 HSD17B7P56937 341 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 SLC13A2Q13183 592 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 DSG2Q14126 1118 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 LTB4RQ15722 352 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 REEP3Q6NUK4 255 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 MED25Q71SY5 747 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 CBLL1Q75N03 491 aa19.67■□□□□ 0.74
TPM1-208ENST00000404484 PATL1Q86TB9 770 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms