RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 MIPOL1Q8TD10 442 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 GIPC3Q8TF64 312 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 SKA2Q8WVK7 121 aaPredicted RBP6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 TRUB1Q8WWH5 349 aaKnown RBP6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 SCAMP4Q969E2 229 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 ABTB1Q969K4 478 aaPredicted RBP6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 TIFAQ96CG3 184 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 COQ8BQ96D53 544 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 YIPF6Q96EC8 236 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 MARS2Q96GW9 593 aaKnown RBP6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 CCDC138Q96M89 665 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 OR4K3Q96R72 315 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 PITX2Q99697 317 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 RIBC2Q9H4K1 309 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 RHBDL2Q9NX52 303 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 STOX2Q9P2F5 926 aaPredicted RBP6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 VPS29Q9UBQ0 182 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 NDRG4Q9ULP0 352 aaKnown RBP6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 CCL26Q9Y258 94 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 B3GNT3Q9Y2A9 372 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 BTBD3Q9Y2F9 522 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 U3KQV3 271 aa6.42□□□□□ -1.38
CSNK2A1-204ENST00000400227 E7EQ34 232 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 PTGES3LE9PB15 166 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 hCG_2039718K7EN88 272 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 XPNPEP2O43895 674 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 MRPS14O60783 128 aaKnown RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 MOSPD3O75425 235 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 JRKO75564 520 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 GCM2O75603 506 aaPredicted RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 SULT1C4O75897 302 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 DIRAS1O95057 198 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 GABARAPO95166 117 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 ETHE1O95571 254 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 ANGPTL1O95841 491 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 MT-ND2P03891 347 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 ABCB1P08183 1280 aaPredicted RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 TFPTP0C1Z6 253 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 EFNA1P20827 205 aaPredicted RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 IDSP22304 550 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 PPIBP23284 216 aaKnown RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 FMO3P31513 532 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 PCGF2P35227 344 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 HNF4AP41235 474 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 IL12RB1P42701 662 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 MAP2K4P45985 399 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 ASMTP46597 345 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 BDKRB1P46663 353 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 SLC35A2P78381 396 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 EMX1Q04741 257 aaPredicted RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 NAE1Q13564 534 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 VEZF1Q14119 521 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 SIM2Q14190 667 aaPredicted RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 MAD2L1BPQ15013 274 aaPredicted RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 NPTX1Q15818 432 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 CCSMST1Q4G0I0 132 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 B3GNTL1Q67FW5 361 aaPredicted RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 TMEM215Q68D42 235 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 ARMC6Q6NXE6 501 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 AGTRAPQ6RW13 159 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 DCDC5Q6ZRR9 648 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 ZNF621Q6ZSS3 439 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 CCDC149Q6ZUS6 474 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 DPPA4Q7L190 304 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 TSEN54Q7Z6J9 526 aaKnown RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 GALNT10Q86SR1 603 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 FAM90A1Q86YD7 464 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 CCDC71Q8IV32 467 aaPredicted RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 RASGEF1AQ8N9B8 481 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 TTC29Q8NA56 475 aaPredicted RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 ZFP90Q8TF47 636 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 CHPT1Q8WUD6 406 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 ASZ1Q8WWH4 475 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 ATL1Q8WXF7 558 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 STARD8Q92502 1023 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 C7orf34Q96L11 122 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 DEFB118Q96PH6 123 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 PANX1Q96RD7 426 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 TAAR9Q96RI9 348 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 SIGLEC11Q96RL6 698 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 PKP4Q99569 1192 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 HEPHQ9BQS7 1158 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 CCM2Q9BSQ5 444 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 DUSP26Q9BV47 211 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 RIOK2Q9BVS4 552 aaKnown RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 DGCR6LQ9BY27 220 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 TPT1P8Q9HAU6 139 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 BRF2Q9HAW0 419 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 SGK2Q9HBY8 427 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 PDP1Q9P0J1 537 aaPredicted RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 AASSQ9UDR5 926 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 ATP6V1HQ9UI12 483 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 BAG5Q9UL15 447 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 SLC45A2Q9UMX9 530 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 EXO1Q9UQ84 846 aaKnown RBP6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 TPRKBQ9Y3C4 175 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 GMPPBQ9Y5P6 360 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 AP1M2Q9Y6Q5 423 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 DENND4AQ7Z401 1863 aa6.41□□□□□ -1.38
CSNK2A1-204ENST00000400227 NUP210Q8TEM1 1887 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms