RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ANKRD33BA6NCL7 494 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 SMIM23A6NLE4 172 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 CAPN14A8MX76 684 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 FOXO6A8MYZ6 492 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 PRSS44E7EML9 344 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 G3V3Y1 287 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 UBFD1O14562 309 aaKnown RBP13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 COPEO14579 308 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 ADAM10O14672 748 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 ZNHIT1O43257 154 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 PCDH7O60245 1069 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 ERAL1O75616 437 aaKnown RBP13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 NUDT17P0C025 328 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 DRD2P14416 443 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 S1PR1P21453 382 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 NT5EP21589 574 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 TIA1P31483 386 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 DNASE1L1P49184 302 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 TMED10P49755 219 aaKnown RBP13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 NAGLUP54802 743 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 RAE1P78406 368 aaKnown RBP13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 MGAT2Q10469 447 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 PRICKLE4Q2TBC4 344 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 HLA-DQA1Q5Y7H0 255 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 SAMD14Q8IZD0 417 aaPredicted RBP13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 MMP21Q8N119 569 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 RIBC1Q8N443 379 aaPredicted RBP13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 TMEM251Q8N6I4 163 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 ADIPOR1Q96A54 375 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 CTHRC1Q96CG8 243 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 CNRIP1Q96F85 164 aaPredicted RBP13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 ZNF681Q96N22 645 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 KCNA7Q96RP8 456 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 SHCBP1LQ9BZQ2 653 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 DEFB127Q9H1M4 99 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 MKS1Q9NXB0 559 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 TUBA8Q9NY65 449 aaPredicted RBP13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 MAT2BQ9NZL9 334 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 ZNF639Q9UID6 485 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 CFL2Q9Y281 166 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 TIMM22Q9Y584 194 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 CHCHD2Q9Y6H1 151 aaPredicted RBP13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 ZNF780BQ9Y6R6 833 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 CACNA1DQ01668 2161 aa13.7□□□□□ -0.22
SMIM11A-203ENST00000399299 A0A1B0GVC2 190 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 GNG14A0A1W2PPG7 69 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 OR14I1A6ND48 311 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 FAM166BA8MTA8 275 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 TP53I11O14683 189 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 TPOP07202 933 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 CPA3P15088 417 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 KRT4P19013 534 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 GPX3P22352 226 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 PIGAP37287 484 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 FEN1P39748 380 aaKnown RBP13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 MAGEA5P43359 124 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 ALDH9A1P49189 494 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 NR0B1P51843 470 aaKnown RBP13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 FOXA1P55317 472 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 NRG3P56975 720 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 VSNL1P62760 191 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 HMGCS1Q01581 520 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 HEPACAMQ14CZ8 416 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 RPS6KA2Q15349 733 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 ZNF630Q2M218 657 aaPredicted RBP13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 TBCELQ5QJ74 424 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 CD163Q86VB7 1156 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 LRRC25Q8N386 305 aaPredicted RBP13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 FAM13CQ8NE31 585 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 OR10G3Q8NGC4 313 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 APIPQ96GX9 242 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 SECISBP2Q96T21 854 aaKnown RBP13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 TP63Q9H3D4 680 aaPredicted RBP13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 HEY2Q9UBP5 337 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 CNOT11Q9UKZ1 510 aaKnown RBP13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 BOKQ9UMX3 212 aaPredicted RBP13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 DLGAP4Q9Y2H0 992 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 NPFFR2Q9Y5X5 522 aa13.69□□□□□ -0.22
SMIM11A-203ENST00000399299 PHF3Q92576 2039 aaKnown RBP13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 HNRNPRO43390 633 aaKnown RBP13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 SUSD5O60279 629 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 IL3P08700 152 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 KCNJ2P63252 427 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 DUSP2Q05923 314 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 CFAP157Q5JU67 520 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 PRAMEF20Q5VT98 475 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 LIPMQ5VYY2 423 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 SP5Q6BEB4 398 aaPredicted RBP13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 FAM111BQ6SJ93 734 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 TRILQ7L0X0 811 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 TRIM46Q7Z4K8 759 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 C4orf33Q8N1A6 199 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 CCDC63Q8NA47 563 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 ZNF675Q8TD23 568 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 C16orf78Q8WTQ4 265 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 ERP27Q96DN0 273 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 METTL2AQ96IZ6 378 aaKnown RBP13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 BRINP2Q9C0B6 783 aa13.68□□□□□ -0.22
SMIM11A-203ENST00000399299 ZNF703Q9H7S9 590 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms