RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 OPRM1P35372 400 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 PIK3CBP42338 1070 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 SSR2P43308 183 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 SLC37A1P57057 533 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 SORDQ00796 357 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 LTBQ06643 244 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 CRYZQ08257 329 aaKnown RBP8.02□□□□□ -1.13
CAPN3-208ENST00000397204 PDIA2Q13087 525 aaKnown RBP8.02□□□□□ -1.13
CAPN3-208ENST00000397204 ZNF267Q14586 743 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-208ENST00000397204 SPRED3Q2MJR0 410 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 NHSL2Q5HYW2 709 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 RNF111Q6ZNA4 994 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 DGAT2L6Q6ZPD8 337 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 CYS1Q717R9 158 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 ZCCHC7Q8N3Z6 543 aaKnown RBP8.02□□□□□ -1.13
CAPN3-208ENST00000397204 SPATA6LQ8N4H0 392 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 PDPRQ8NCN5 879 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 NAXEQ8NCW5 288 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 FBXO36Q8NEA4 188 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 OR10G3Q8NGC4 313 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 DIO2Q92813 273 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 RIT1Q92963 219 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 HSPBAP1Q96EW2 488 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 C18orf12Q96KH6 178 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 UBXN10Q96LJ8 280 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 ZNF597Q96LX8 424 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 JSRP1Q96MG2 331 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-208ENST00000397204 WDR83Q9BRX9 315 aaKnown RBP8.02□□□□□ -1.13
CAPN3-208ENST00000397204 CENPKQ9BS16 269 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 ANGPTL4Q9BY76 406 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 PRDM14Q9GZV8 571 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 PLEKHF2Q9H8W4 249 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 CALHM2Q9HA72 323 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 SNX15Q9NRS6 342 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 JKAMPQ9P055 326 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 PHF11Q9UIL8 331 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 MTO1Q9Y2Z2 717 aaKnown RBP8.02□□□□□ -1.13
CAPN3-208ENST00000397204 NINQ8N4C6 2090 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 ZANQ9Y493 2812 aa8.02□□□□□ -1.13
CAPN3-208ENST00000397204 ARID1AO14497 2285 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 EML6Q6ZMW3 1958 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 STAB1Q9NY15 2570 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 C2orf92A0A1B0GVN3 265 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 MBD3L4A6NDZ8 208 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-208ENST00000397204 MBD3L3A6NE82 208 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-208ENST00000397204 MBD3L5A6NJ08 208 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-208ENST00000397204 OR10H2O60403 315 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 CDH16O75309 829 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 RGS9O75916 674 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-208ENST00000397204 S100BP04271 92 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-208ENST00000397204 SLC35E2BP0CK96 405 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 SLC35E2P0CK97 266 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 PCNAP12004 261 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 STMN1P16949 149 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 TACR1P25103 407 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 BUD31P41223 144 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-208ENST00000397204 CDK9P50750 372 aaKnown RBP8.01□□□□□ -1.13
CAPN3-208ENST00000397204 ZNF136P52737 540 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 HERVK_113P63132 956 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 ERVK-8P63133 956 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 RPP38P78345 283 aaKnown RBP8.01□□□□□ -1.13
CAPN3-208ENST00000397204 EBPQ15125 230 aaKnown RBP8.01□□□□□ -1.13
CAPN3-208ENST00000397204 OR4D1Q15615 310 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 FBXO48Q5FWF7 155 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 SHEQ5VZ18 495 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 LRRC70Q7Z2Q7 622 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 WFDC11Q8NEX6 87 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 MBD3L2Q8NHZ7 208 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-208ENST00000397204 STAG3L4Q8TBR4 150 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 ZPLD1Q8TCW7 415 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 CDKL2Q92772 493 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 DACH2Q96NX9 599 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 GNRHR2Q96P88 292 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 GAL3ST4Q96RP7 486 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 ERVK-6Q9BXR3 956 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 WWTR1Q9GZV5 400 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 OR51B5Q9H339 312 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 UBQLN3Q9H347 655 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 PSD3Q9NYI0 1048 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 TXNDC16Q9P2K2 825 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 FETUBQ9UGM5 382 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 RNF112Q9ULX5 631 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 ERVK-19Q9WJR5 959 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 TSC22D4Q9Y3Q8 395 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 NPFFR2Q9Y5X5 522 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 HIVEP2P31629 2446 aa8.01□□□□□ -1.13
CAPN3-208ENST00000397204 FN1P02751 2386 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 FAM171A2A8MVW0 826 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 K7EPI3 171 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 SAP18O00422 153 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 TP73O15350 636 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 PHGDHO43175 533 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 ARHGEF9O43307 516 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 SH3BGRLO75368 114 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 SEC31AO94979 1220 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 ACTL6AO96019 429 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 INHBBP09529 407 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 NAGAP17050 411 aa8□□□□□ -1.13
CAPN3-208ENST00000397204 TCP1P17987 556 aaKnown RBP8□□□□□ -1.13
CAPN3-208ENST00000397204 BMP7P18075 431 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms