RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 OR4A15Q8NGL6 344 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 PPCDCQ96CD2 204 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 RMND5BQ96G75 393 aaPredicted RBP14.03□□□□□ -0.16
CAPN3-207ENST00000397200 TEFMQ96QE5 360 aaKnown RBP14.03□□□□□ -0.16
CAPN3-207ENST00000397200 OSBPL10Q9BXB5 764 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 ASPSCR1Q9BZE9 553 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 GABARAPL1Q9H0R8 117 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 RBM38Q9H0Z9 239 aaKnown RBP14.03□□□□□ -0.16
CAPN3-207ENST00000397200 LHX9Q9NQ69 397 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 PRDM7Q9NQW5 492 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 SH3BP4Q9P0V3 963 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 NDOR1Q9UHB4 597 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 NAALAD2Q9Y3Q0 740 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 G3V2T6 193 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 GALR3O60755 368 aaPredicted RBP14.02□□□□□ -0.16
CAPN3-207ENST00000397200 DPM1O60762 260 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 PGM3O95394 542 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 MED26O95402 600 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 TIAF1O95411 115 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 GBAP04062 536 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 HBQ1P09105 142 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 HIST1H1TP22492 207 aaPredicted RBP14.02□□□□□ -0.16
CAPN3-207ENST00000397200 ATP5A1P25705 553 aaKnown RBP14.02□□□□□ -0.16
CAPN3-207ENST00000397200 CERS1P27544 350 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 ETV5P41161 510 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 GCGRP47871 477 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 AVPR1BP47901 424 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 SNRPNP63162 240 aaKnown RBP14.02□□□□□ -0.16
CAPN3-207ENST00000397200 HBA1P69905 142 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 MC1RQ01726 317 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 EPS8Q12929 822 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 CCNYL2Q5T2Q4 361 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 DCAF12Q5T6F0 453 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 ZNF793Q6ZN11 406 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 TMPRSS7Q7RTY8 843 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 PRSS41Q7RTY9 318 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 NATD1Q8N6N6 113 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 METTL25Q8N6Q8 603 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 ACOT4Q8N9L9 421 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 OR52N2Q8NGI0 321 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 OR5K1Q8NHB7 308 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 TAAR9Q96RI9 348 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 SERINC2Q96SA4 455 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 DDX31Q9H8H2 851 aaKnown RBP14.02□□□□□ -0.16
CAPN3-207ENST00000397200 CLK4Q9HAZ1 481 aaKnown RBP14.02□□□□□ -0.16
CAPN3-207ENST00000397200 IL1RAPQ9NPH3 570 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 GPATCH2Q9NW75 528 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 DHCR7Q9UBM7 475 aaKnown RBP14.02□□□□□ -0.16
CAPN3-207ENST00000397200 SATB2Q9UPW6 733 aa14.02□□□□□ -0.16
CAPN3-207ENST00000397200 A0A0A6YYC8 382 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 I3L1I5 382 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 DSCR3O14972 297 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 FOXS1O43638 330 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 B3GALT2O43825 422 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 TNFRSF21O75509 655 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 NSA2O95478 260 aaKnown RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 IL3P08700 152 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 THRBP10828 461 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 EFNA1P20827 205 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 ALAS2P22557 587 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 DCTP40126 519 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 CRYBA2P53672 197 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 NR1H2P55055 460 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 FADDQ13158 208 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 PRSS53Q2L4Q9 553 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 BORAQ6PGQ7 559 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 PIWIL3Q7Z3Z3 882 aaKnown RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 SATL1Q86VE3 508 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 TSPAN14Q8NG11 270 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 OR9A4Q8NGU2 314 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 CLIP3Q96DZ5 547 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 MVB12AQ96EY5 273 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 FBXL20Q96IG2 436 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 ZPBPQ9BS86 351 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 YIPF3Q9GZM5 350 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 TUBA8Q9NY65 449 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 CDC14AQ9UNH5 594 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 A0A0A6YYD5 115 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 A0A1B0GX78 115 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 A0A1W2PNU3 283 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 PMS2P1A4D2B8 440 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 ZNF860A6NHJ4 632 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 SGK494L7N484 410 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 CPNE3O75131 537 aaKnown RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 C6orf47O95873 294 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 ALBP02768 609 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 DDCP20711 480 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 PAX7P23759 505 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 FRKP42685 505 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 ALDH3B2P48448 385 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 KNTC1P50748 2209 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 MAPK12P53778 367 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 VAC14Q08AM6 782 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 RBBP4Q09028 425 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 ELOAQ14241 798 aaKnown RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 SLC9A5Q14940 896 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 NADK2Q4G0N4 442 aa14.01□□□□□ -0.17
CAPN3-207ENST00000397200 LRRC23Q53EV4 343 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 OTUD3Q5T2D3 398 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-207ENST00000397200 RHBDD2Q6NTF9 364 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms