RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 CLPSP04118 112 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 NME5P56597 212 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 MLF1P58340 268 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 MRPS35P82673 323 aaKnown RBP17.83■□□□□ 0.44
HOXA9-202ENST00000396345 RPS6KA2Q15349 733 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 MPEG1Q2M385 716 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 TRMT12Q53H54 448 aaKnown RBP17.83■□□□□ 0.44
HOXA9-202ENST00000396345 SOWAHCQ53LP3 525 aaPredicted RBP17.83■□□□□ 0.44
HOXA9-202ENST00000396345 TMEM198Q66K66 360 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 C9orf40Q8IXQ3 194 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 LGI4Q8N135 537 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 BEST3Q8N1M1 668 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 ARMC10Q8N2F6 343 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 ZADH2Q8N4Q0 377 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 ZFP28Q8NHY6 868 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 COQ8BQ96D53 544 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 ZBED6CLQ96FA7 236 aaPredicted RBP17.83■□□□□ 0.44
HOXA9-202ENST00000396345 MARK4Q96L34 752 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 SIKE1Q9BRV8 207 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 OR10A5Q9H207 317 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 FGFR1OP2Q9NVK5 253 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 ABI3Q9P2A4 366 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 BCAP29Q9UHQ4 241 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 ZNF639Q9UID6 485 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 DCTN4Q9UJW0 460 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 GPR45Q9Y5Y3 372 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 CPAMD8Q8IZJ3 1885 aa17.83■□□□□ 0.44
HOXA9-202ENST00000396345 CNTRLQ7Z7A1 2325 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 TMEM200CA6NKL6 621 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 ANKRD28O15084 1053 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 IDO1P14902 403 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 SOX18P35713 384 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 FRKP42685 505 aaPredicted RBP17.82■□□□□ 0.44
HOXA9-202ENST00000396345 CLNS1AP54105 237 aaKnown RBP17.82■□□□□ 0.44
HOXA9-202ENST00000396345 MANFP55145 182 aaKnown RBP17.82■□□□□ 0.44
HOXA9-202ENST00000396345 EXOSC7Q15024 291 aaKnown RBP17.82■□□□□ 0.44
HOXA9-202ENST00000396345 GSTA3Q16772 222 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 PGS1Q32NB8 556 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 SLC29A4Q7RTT9 530 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 ZNF551Q7Z340 670 aaPredicted RBP17.82■□□□□ 0.44
HOXA9-202ENST00000396345 NATD1Q8N6N6 113 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 ZNF615Q8N8J6 731 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 RFWD2Q8NHY2 731 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 ERP27Q96DN0 273 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 BHLHE41Q9C0J9 482 aaPredicted RBP17.82■□□□□ 0.44
HOXA9-202ENST00000396345 LIN28AQ9H9Z2 209 aaKnown RBP17.82■□□□□ 0.44
HOXA9-202ENST00000396345 ACSS1Q9NUB1 689 aaPredicted RBP17.82■□□□□ 0.44
HOXA9-202ENST00000396345 PLA2G3Q9NZ20 509 aa17.82■□□□□ 0.44
HOXA9-202ENST00000396345 DYTNA2CJ06 578 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 E9PBE3 544 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 FCHO1O14526 889 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 BCAS2O75934 225 aaPredicted RBP17.81■□□□□ 0.44
HOXA9-202ENST00000396345 SLITRK5O94991 958 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 WDPCPO95876 746 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 CBX7O95931 251 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 TROVE2P10155 538 aaKnown RBP eCLIP17.81■□□□□ 0.44
HOXA9-202ENST00000396345 EFNA1P20827 205 aaPredicted RBP17.81■□□□□ 0.44
HOXA9-202ENST00000396345 GPC1P35052 558 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 UFM1P61960 85 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 ARG2P78540 354 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 HSPB3Q12988 150 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 PDCD4Q53EL6 469 aaKnown RBP17.81■□□□□ 0.44
HOXA9-202ENST00000396345 TMEM107Q6UX40 140 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 CAMKMTQ7Z624 323 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 OR52R1Q8NGF1 315 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 NUBPLQ8TB37 319 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 STON2Q8WXE9 905 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 HAS2Q92819 552 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 GAL3ST4Q96RP7 486 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 DUSP26Q9BV47 211 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 WWTR1Q9GZV5 400 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 RNF32Q9H0A6 362 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 MYOTQ9UBF9 498 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 CFL2Q9Y281 166 aa17.81■□□□□ 0.44
HOXA9-202ENST00000396345 A0A0G2JND7 137 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 C2orf92A0A1B0GVN3 265 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 A0A1W2PRB8 838 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 WWP2O00308 870 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 PLOD2O00469 737 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 PLOD3O60568 738 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 PRAMEF2O60811 474 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 ITGA10O75578 1167 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 F10P00742 488 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 MC3RP41968 323 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 ST13P50502 369 aaKnown RBP17.8■□□□□ 0.44
HOXA9-202ENST00000396345 SRSF11Q05519 484 aaKnown RBP17.8■□□□□ 0.44
HOXA9-202ENST00000396345 DUSP8Q13202 625 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 EBPQ15125 230 aaKnown RBP17.8■□□□□ 0.44
HOXA9-202ENST00000396345 HLA-DQA1Q5Y7H0 255 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 C16orf47Q6ZP98 133 aaPredicted RBP17.8■□□□□ 0.44
HOXA9-202ENST00000396345 RBMXL3Q8N7X1 1067 aaKnown RBP17.8■□□□□ 0.44
HOXA9-202ENST00000396345 TEX19Q8NA77 164 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 SIMC1Q8NDZ2 872 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 OR7G2Q8NG99 324 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 C16orf52Q8NHV5 167 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 TESCQ96BS2 214 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 TEX37Q96LM6 180 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 ZBTB18Q99592 522 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 MFRPQ9BY79 579 aa17.8■□□□□ 0.44
HOXA9-202ENST00000396345 CLMPQ9H6B4 373 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms