RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 DPH2Q9BQC3 489 aaPredicted RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 MS4A8Q9BY19 250 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 A4GALTQ9NPC4 353 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 TIGARQ9NQ88 270 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ARL15Q9NXU5 204 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 RNF6Q9Y252 685 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 PADI2Q9Y2J8 665 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ENTPD2Q9Y5L3 495 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 KCNE2Q9Y6J6 123 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 LINC00862A6NCI5 91 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 OR5K4A6NMS3 321 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 TMEM229AB2RXF0 380 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 H3BM21 787 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 HS6ST1O60243 411 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SEC22BO75396 215 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 CYC1P08574 325 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 LINC00032P0C843 101 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SRFP11831 508 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 IDSP22304 550 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 CHMP24386 653 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 GADD45AP24522 165 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 IGFALSP35858 605 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 CTSKP43235 329 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ARHGDIAP52565 204 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 DIO3P55073 304 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SRP54P61011 504 aaKnown RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 UBE2IP63279 158 aaKnown RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 DOC2AQ14183 400 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 IRF4Q15306 451 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 RBBP7Q16576 425 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ENPP6Q6UWR7 440 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SLC46A3Q7Z3Q1 461 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 AMZ2Q86W34 360 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 RDH10Q8IZV5 341 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 CLDN19Q8N6F1 224 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 MFSD9Q8NBP5 474 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 GALNT11Q8NCW6 608 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ZNF540Q8NDQ6 660 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 KBTBD8Q8NFY9 601 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 OR7G3Q8NG95 312 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 TOE1Q96GM8 510 aaKnown RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 KCNA7Q96RP8 456 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ACAT2Q9BWD1 397 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 NIPAL2Q9H841 368 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 PHPT1Q9NRX4 125 aaPredicted RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 TNFRSF10DQ9UBN6 386 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 PILRAQ9UKJ1 303 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ACAD8Q9UKU7 415 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 DUSP12Q9UNI6 340 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 A0A075B6Q4 140 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 PLK4O00444 970 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SEC14L5O43304 696 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 NDUFA2O43678 99 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 OR7A10O76100 309 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 FURINP09958 794 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 HLA-DMAP28067 261 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 CSTF2P33240 577 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS41-203ENST00000395969 GRK5P34947 590 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 BSGP35613 385 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 GZMKP49863 264 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 AKR1D1P51857 326 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 B2MP61769 119 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SNTA1Q13424 505 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 KIR2DS3Q14952 304 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 MAD2L1BPQ15013 274 aaPredicted RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 TBCEQ15813 527 aaPredicted RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 UGT8Q16880 541 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 UAP1L1Q3KQV9 507 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 TOR1AIP1Q5JTV8 583 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SPANXN2Q5MJ10 180 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 TMEM220Q6QAJ8 160 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SPESP1Q6UW49 350 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SERPINA13PQ6UXR4 307 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 C1orf122Q6ZSJ8 110 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 RNF44Q7L0R7 432 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 CDH24Q86UP0 819 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ANKRD46Q86W74 232 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 HIPK1Q86Z02 1210 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ADHFE1Q8IWW8 467 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 MICU2Q8IYU8 434 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 FAM26EQ8N5C1 309 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SLC47A1Q96FL8 570 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ZBTB18Q99592 522 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 FUZQ9BT04 418 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 SLC6A16Q9GZN6 736 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ERVMER34-1Q9H9K5 563 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 MCCC2Q9HCC0 563 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 C14orf119Q9NWQ9 140 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 ZNF282Q9UDV7 671 aaPredicted RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 KLHL21Q9UJP4 597 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 KCND3Q9UK17 655 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 UTS2RQ9UKP6 389 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 NDRG4Q9ULP0 352 aaKnown RBP5.08□□□□□ -1.6
VPS41-203ENST00000395969 INVSQ9Y283 1065 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 BTRCQ9Y297 605 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 PCDHB11Q9Y5F2 797 aa5.08□□□□□ -1.6
VPS41-203ENST00000395969 CEP192Q8TEP8 1941 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 DSPPQ9NZW4 1301 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 A0A0B4J293 547 aa5.07□□□□□ -1.6
VPS41-203ENST00000395969 PIPSLA2A3N6 862 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms