RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 TCP10LQ8TDR4 215 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 EXOSC8Q96B26 276 aaKnown RBP28.37■■■□□ 2.13
CMTM4-202ENST00000394106 FAM173AQ9BQD7 235 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 MECRQ9BV79 373 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 RRAGDQ9NQL2 400 aaPredicted RBP28.37■■■□□ 2.13
CMTM4-202ENST00000394106 MAT2BQ9NZL9 334 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 TINAGQ9UJW2 476 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 DIDO1Q9BTC0 2240 aaKnown RBP28.37■■■□□ 2.13
CMTM4-202ENST00000394106 FAM166BA8MTA8 275 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 CLDN1O95832 211 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 PPIAP62937 165 aaKnown RBP28.36■■■□□ 2.13
CMTM4-202ENST00000394106 HEPACAMQ14CZ8 416 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 LTB4RQ15722 352 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 KRT71Q3SY84 523 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 TMEM64Q6YI46 380 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 GK5Q6ZS86 529 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 ZNF441Q8N8Z8 693 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 C11orf24Q96F05 449 aaPredicted RBP28.36■■■□□ 2.13
CMTM4-202ENST00000394106 ZNF681Q96N22 645 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 TMEM109Q9BVC6 243 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 SIRT5Q9NXA8 310 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 SUCOQ9UBS9 1254 aaKnown RBP28.36■■■□□ 2.13
CMTM4-202ENST00000394106 BCAP29Q9UHQ4 241 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 ZNF835Q9Y2P0 537 aa28.36■■■□□ 2.13
CMTM4-202ENST00000394106 FBXO45P0C2W1 286 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 CREB1P16220 341 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 S1PR1P21453 382 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 DNASE1L1P49184 302 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 MGAT2Q10469 447 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 MAP4K2Q12851 820 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 EXOSC7Q15024 291 aaKnown RBP28.35■■■□□ 2.13
CMTM4-202ENST00000394106 CMPK2Q5EBM0 449 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 SLC22A10Q63ZE4 541 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 BNC2Q6ZN30 1099 aaPredicted RBP28.35■■■□□ 2.13
CMTM4-202ENST00000394106 MAMDC2Q7Z304 686 aaPredicted RBP28.35■■■□□ 2.13
CMTM4-202ENST00000394106 OR52N2Q8NGI0 321 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 OR5M3Q8NGP4 307 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 TRMOQ9BU70 441 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 TTTY12Q9BZ98 90 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 DEFB127Q9H1M4 99 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 RAB21Q9UL25 225 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 POLR3HQ9Y535 204 aaPredicted RBP28.35■■■□□ 2.13
CMTM4-202ENST00000394106 PTGDR2Q9Y5Y4 395 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 MAST4O15021 2626 aa28.35■■■□□ 2.13
CMTM4-202ENST00000394106 ACOT7O00154 380 aa28.34■■■□□ 2.13
CMTM4-202ENST00000394106 AZIN1O14977 448 aa28.34■■■□□ 2.13
CMTM4-202ENST00000394106 RSL1D1O76021 490 aaKnown RBP28.34■■■□□ 2.13
CMTM4-202ENST00000394106 PDE9AO76083 593 aa28.34■■■□□ 2.13
CMTM4-202ENST00000394106 PIGAP37287 484 aa28.34■■■□□ 2.13
CMTM4-202ENST00000394106 ZNF844Q08AG5 666 aa28.34■■■□□ 2.13
CMTM4-202ENST00000394106 ZNF763Q0D2J5 394 aa28.34■■■□□ 2.13
CMTM4-202ENST00000394106 DND1Q8IYX4 353 aaKnown RBP28.34■■■□□ 2.13
CMTM4-202ENST00000394106 OR10G3Q8NGC4 313 aa28.34■■■□□ 2.13
CMTM4-202ENST00000394106 TP53INP1Q96A56 240 aa28.34■■■□□ 2.13
CMTM4-202ENST00000394106 GIMAP4Q9NUV9 329 aa28.34■■■□□ 2.13
CMTM4-202ENST00000394106 ENTPD4Q9Y227 616 aa28.34■■■□□ 2.13
CMTM4-202ENST00000394106 DOPEY1Q5JWR5 2465 aa28.33■■■□□ 2.13
CMTM4-202ENST00000394106 MYO7BQ6PIF6 2116 aa28.33■■■□□ 2.13
CMTM4-202ENST00000394106 GSTM5P46439 218 aa28.33■■■□□ 2.13
CMTM4-202ENST00000394106 PRAMEF20Q5VT98 475 aa28.33■■■□□ 2.13
CMTM4-202ENST00000394106 Q6ZPB1 254 aaPredicted RBP28.33■■■□□ 2.13
CMTM4-202ENST00000394106 FGD2Q7Z6J4 655 aa28.33■■■□□ 2.13
CMTM4-202ENST00000394106 CHERPQ8IWX8 916 aaKnown RBP28.33■■■□□ 2.13
CMTM4-202ENST00000394106 CCDC116Q8IYX3 515 aa28.33■■■□□ 2.13
CMTM4-202ENST00000394106 PAQR8Q8TEZ7 354 aa28.33■■■□□ 2.13
CMTM4-202ENST00000394106 ADIPOR1Q96A54 375 aa28.33■■■□□ 2.13
CMTM4-202ENST00000394106 SH2D2AQ9NP31 389 aa28.33■■■□□ 2.13
CMTM4-202ENST00000394106 TUBA8Q9NY65 449 aaPredicted RBP28.33■■■□□ 2.13
CMTM4-202ENST00000394106 DTX4Q9Y2E6 619 aa28.33■■■□□ 2.13
CMTM4-202ENST00000394106 A0A1B0GTH9 108 aa28.32■■■□□ 2.12
CMTM4-202ENST00000394106 CHRNGP07510 517 aa28.32■■■□□ 2.12
CMTM4-202ENST00000394106 ESRRAP11474 423 aaPredicted RBP28.32■■■□□ 2.12
CMTM4-202ENST00000394106 PCSK2P16519 638 aa28.32■■■□□ 2.12
CMTM4-202ENST00000394106 GPX3P22352 226 aa28.32■■■□□ 2.12
CMTM4-202ENST00000394106 MRPS35P82673 323 aaKnown RBP28.32■■■□□ 2.12
CMTM4-202ENST00000394106 C2orf80Q0P641 193 aa28.32■■■□□ 2.12
CMTM4-202ENST00000394106 TRMT12Q53H54 448 aaKnown RBP28.32■■■□□ 2.12
CMTM4-202ENST00000394106 SLC22A16Q86VW1 577 aa28.32■■■□□ 2.12
CMTM4-202ENST00000394106 SIMC1Q8NDZ2 872 aa28.32■■■□□ 2.12
CMTM4-202ENST00000394106 CCDC120Q96HB5 630 aa28.32■■■□□ 2.12
CMTM4-202ENST00000394106 ZNF639Q9UID6 485 aa28.32■■■□□ 2.12
CMTM4-202ENST00000394106 SLC28A1O00337 649 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 RGS16O15492 202 aaPredicted RBP28.31■■■□□ 2.12
CMTM4-202ENST00000394106 NPHS1O60500 1241 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 SEC22BO75396 215 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 LRATO95237 230 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 NRG3P56975 720 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 DUSP8Q13202 625 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 NNATQ16517 81 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 NOXRED1Q6NXP6 359 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 RGS9BPQ6ZS82 235 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 ZCCHC23Q6ZST2 131 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 PRR22Q8IZ63 422 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 SAMD14Q8IZD0 417 aaPredicted RBP28.31■■■□□ 2.12
CMTM4-202ENST00000394106 FBXW8Q8N3Y1 598 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 OR52R1Q8NGF1 315 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 ZBTB9Q96C00 473 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 CTHRC1Q96CG8 243 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 IL1RL2Q9HB29 575 aa28.31■■■□□ 2.12
CMTM4-202ENST00000394106 SLC35C2Q9NQQ7 365 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms