RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 WASHC1A8K0Z3 465 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 KRT38O76015 456 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 GOSR1O95249 250 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 CLDN9O95484 217 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 IL2RAP01589 272 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 PIK3R1P27986 724 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 FNDC7Q5VTL7 733 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 HLA-DQA1Q5Y7H0 255 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 GOLGA7Q7Z5G4 137 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 TGIF2LYQ8IUE0 185 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 GALNT12Q8IXK2 581 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 NAXEQ8NCW5 288 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 TRPC4APQ8TEL6 797 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 NRGNQ92686 78 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 MBD6Q96DN6 1003 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 HSPBAP1Q96EW2 488 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 RMND5BQ96G75 393 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 TMEM41AQ96HV5 264 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 GPR78Q96P69 363 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 NTMT1Q9BV86 223 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 C15orf41Q9Y2V0 281 aa16.02■□□□□ 0.16
SNRPA1-202ENST00000394082 C15orf38-AP3S2A0A0A6YYH1 394 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 A6NNC1 897 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 PGRMC2O15173 223 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 BMP5P22003 454 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 SSTR4P31391 388 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 UQCRC1P31930 480 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 CASP3P42574 277 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 TRPC1P48995 793 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 IRF9Q00978 393 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 MROH9Q5TGP6 573 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 ZDHHC24Q6UX98 284 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 CAMKMTQ7Z624 323 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 TNIP2Q8NFZ5 429 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 OR4K14Q8NGD5 310 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 RILPQ96NA2 401 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 ALPK1Q96QP1 1244 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 GPATCH1Q9BRR8 931 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 OR10A5Q9H207 317 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 CCM2LQ9NUG4 571 aaPredicted RBP16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 AHSPQ9NZD4 102 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 TMCO1Q9UM00 188 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 CFL2Q9Y281 166 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 RNF11Q9Y3C5 154 aa16.01■□□□□ 0.15
SNRPA1-202ENST00000394082 PRRC2AP48634 2157 aaKnown RBP16■□□□□ 0.15
SNRPA1-202ENST00000394082 A0A096LPK6 155 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 MBD3L4A6NDZ8 208 aaPredicted RBP16■□□□□ 0.15
SNRPA1-202ENST00000394082 MBD3L3A6NE82 208 aaPredicted RBP16■□□□□ 0.15
SNRPA1-202ENST00000394082 MBD3L5A6NJ08 208 aaPredicted RBP16■□□□□ 0.15
SNRPA1-202ENST00000394082 IL18BPO95998 194 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 FBXW4P57775 412 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 SORDQ00796 357 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 FRG2Q64ET8 278 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 PAGE2Q7Z2X7 111 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 CCDC25Q86WR0 208 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 KIF18BQ86Y91 864 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 MBD3L2Q8NHZ7 208 aaPredicted RBP16■□□□□ 0.15
SNRPA1-202ENST00000394082 POM121Q96HA1 1249 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 GNRHR2Q96P88 292 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 FRG2BQ96QU4 278 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 CALHM2Q9HA72 323 aa16■□□□□ 0.15
SNRPA1-202ENST00000394082 STX16-NPEPL1H3BU86 382 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 OR7A17O14581 309 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 STX16O14662 325 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 GUCY1B2O75343 617 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 TRAPPC6AO75865 159 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 ACTL6AO96019 429 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 ALDOAP04075 364 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 FREM3P0C091 2139 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 RHOXF2BP0C7M4 288 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 CPMP14384 443 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 PORP16435 677 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 S1PR1P21453 382 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 DNASE1P24855 282 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 ABCD3P28288 659 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 TYK2P29597 1187 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 MASP1P48740 699 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 SERPINB8P50452 374 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 XKP51811 444 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 NEK2P51955 445 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 ZNF136P52737 540 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 SNTA1Q13424 505 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 GGTA1PQ4G0N0 100 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 C6orf163Q5TEZ5 329 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 TIGD3Q6B0B8 471 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 ZNF572Q7Z3I7 529 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 CDC20BQ86Y33 519 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 GOT1L1Q8NHS2 421 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 ZPLD1Q8TCW7 415 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 DOK4Q8TEW6 326 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 NOL11Q9H8H0 719 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 TEX10Q9NXF1 929 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 JKAMPQ9P055 326 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 CBLCQ9ULV8 474 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 AKAP6Q13023 2319 aa15.99■□□□□ 0.15
SNRPA1-202ENST00000394082 LRRC14BA6NHZ5 514 aa15.98■□□□□ 0.15
SNRPA1-202ENST00000394082 SIX3O95343 332 aaPredicted RBP15.98■□□□□ 0.15
SNRPA1-202ENST00000394082 ACSL3O95573 720 aa15.98■□□□□ 0.15
SNRPA1-202ENST00000394082 ATP1B1P05026 303 aa15.98■□□□□ 0.15
SNRPA1-202ENST00000394082 ABCB1P08183 1280 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms