RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CREB3L4Q8TEY5 395 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 XAGE5Q8WWM1 108 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 LRR1Q96L50 414 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 GPA33Q99795 319 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 ABCB9Q9NP78 766 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 SLC23A2Q9UGH3 650 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 H7BY64 318 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 EPPINO95925 133 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 CLEC2LP0C7M8 214 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 NR2F1P10589 423 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 GAS1P54826 345 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 PRMT2P55345 433 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 LSM11P83369 360 aaKnown RBP eCLIP17.8■□□□□ 0.44
CBX1-202ENST00000393408 CDK5Q00535 292 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 MESP2Q0VG99 397 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 ATAT1Q5SQI0 421 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 C9orf64Q5T6V5 341 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 OLIG3Q7RTU3 272 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 IQCHQ86VS3 1027 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 AMER3Q8N944 861 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 MORN4Q8NDC4 146 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 TMIEQ8NEW7 156 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 OR5K2Q8NHB8 316 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 NXPE3Q969Y0 559 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 RGMAQ96B86 450 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 ST6GAL2Q96JF0 529 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 PRAP1Q96NZ9 151 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 MCOLN1Q9GZU1 580 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 ZSCAN32Q9NX65 697 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 PLEKHB1Q9UF11 243 aaPredicted RBP17.8■□□□□ 0.44
CBX1-202ENST00000393408 LAMA2P24043 3122 aaKnown RBP17.79■□□□□ 0.44
CBX1-202ENST00000393408 TTC36A6NLP5 189 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 EPHX1P07099 455 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 ADH5P11766 374 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 DDOSTP39656 456 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 HNRNPA0Q13151 305 aaKnown RBP17.79■□□□□ 0.44
CBX1-202ENST00000393408 C3orf38Q5JPI3 329 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 C22orf42Q6IC83 251 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 C1orf94Q6P1W5 598 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 AMZ2Q86W34 360 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 LINC00471Q8N535 108 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 SNX18Q96RF0 628 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 MENTQ9BUN1 341 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 GLIPR2Q9H4G4 154 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 NT5DC2Q9H857 520 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 MARCH7Q9H992 704 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 KCNK12Q9HB15 430 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 TAS2R7Q9NYW3 318 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 TRPC4Q9UBN4 977 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 ADAM29Q9UKF5 820 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 FBXW2Q9UKT8 454 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 SLC9A3R1O14745 358 aaPredicted RBP17.79■□□□□ 0.44
CBX1-202ENST00000393408 ACADMP11310 421 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 SCN1BQ07699 218 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 HYAL2Q12891 473 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 ASAH1Q13510 395 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 TAB1Q15750 504 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 ENTPD8Q5MY95 495 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 FAM131AQ6UXB0 335 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 SZRD1Q7Z422 152 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 PLA2G15Q8NCC3 412 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 OR6T1Q8NGN1 323 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 OR8D1Q8WZ84 308 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 TMEM203Q969S6 136 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 LRRC3BQ96PB8 259 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 SLC9A8Q9Y2E8 581 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 CARD8Q9Y2G2 431 aa17.79■□□□□ 0.44
CBX1-202ENST00000393408 SPIN1Q9Y657 262 aaPredicted RBP17.79■□□□□ 0.44
CBX1-202ENST00000393408 A0A1W2PPV9 198 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 PRRT4C9JH25 899 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 PPP2R1BP30154 601 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 WNT4P56705 351 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 KLHL22Q53GT1 634 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 C1QTNF12Q5T7M4 302 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 XKRXQ6PP77 449 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 PRR23CQ6ZRP0 262 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 GATAD2AQ86YP4 633 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 COX14Q96I36 57 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 AMDHD1Q96NU7 426 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 PHOX2BQ99453 314 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 SLX1AQ9BQ83 275 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 DDX31Q9H8H2 851 aaKnown RBP17.78■□□□□ 0.44
CBX1-202ENST00000393408 MRPS18AQ9NVS2 196 aaKnown RBP17.78■□□□□ 0.44
CBX1-202ENST00000393408 PCDH10Q9P2E7 1040 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 A0A1W2PQL4 384 aaPredicted RBP17.78■□□□□ 0.44
CBX1-202ENST00000393408 MEIOCA2RUB1 952 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 FAM172BPA6NC97 362 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 STK25O00506 426 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 CSF2RAP15509 400 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 HSD17B2P37059 387 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 MNX1P50219 401 aaPredicted RBP17.78■□□□□ 0.44
CBX1-202ENST00000393408 TMEM52BQ4KMG9 183 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 ERN2Q76MJ5 926 aaKnown RBP17.78■□□□□ 0.44
CBX1-202ENST00000393408 KIF18BQ86Y91 864 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 TP53I13Q8NBR0 393 aaPredicted RBP17.78■□□□□ 0.44
CBX1-202ENST00000393408 BBS10Q8TAM1 723 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 ZNF296Q8WUU4 475 aaPredicted RBP17.78■□□□□ 0.44
CBX1-202ENST00000393408 PRRC1Q96M27 445 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 PCBD2Q9H0N5 130 aa17.78■□□□□ 0.44
CBX1-202ENST00000393408 BCL2L10Q9HD36 194 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms