RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 RBMXL1Q96E39 390 aaKnown RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 SNX27Q96L92 541 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 MTERF1Q99551 399 aaKnown RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 LRCH4O75427 683 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 ENGP17813 658 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 EOGTQ5NDL2 527 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 TSTD2Q5T7W7 516 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 OR2S2Q9NQN1 319 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 SLC6A14Q9UN76 642 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 A0A1W2PP18 115 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 SCGB1D1O95968 90 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 UQCRC2P22695 453 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 PHF19Q5T6S3 580 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 PRSS55Q6UWB4 352 aaPredicted RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 CMSS1Q9BQ75 279 aaKnown RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 ACOT13Q9NPJ3 140 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 FAM149AA5PLN7 773 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 GGT3PA6NGU5 568 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 A6NLC8 198 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 VSTM2BA6NLU5 285 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 SEC14L6B5MCN3 397 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 AOC2O75106 756 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 SRPXP78539 464 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 SEMG2Q02383 582 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 LRRC37A5PQ49AS3 106 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 UBL7Q96S82 380 aaPredicted RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 PKP4Q99569 1192 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 PSAT1Q9Y617 370 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 ZNF705GA8MUZ8 300 aaPredicted RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 MEN1O00255 615 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 MED6O75586 246 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 PRKACAP17612 351 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 HNRNPA0Q13151 305 aaKnown RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 FAM43BQ6ZT52 329 aaPredicted RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 SLC19A3Q9BZV2 496 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 ZFR2Q9UPR6 939 aaKnown RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 SPATA31D1Q6ZQQ2 1576 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 E9PI62 339 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 ATXN7L3Q14CW9 347 aaPredicted RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 CPT1BQ92523 772 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 ARMC5Q96C12 935 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 LMF2Q9BU23 707 aaKnown RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 RNF24Q9Y225 148 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 PTHP01270 115 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 MC3RP41968 323 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 FASLGP48023 281 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 PMS2P3Q13401 168 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 GPR176Q14439 515 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 ZNF572Q7Z3I7 529 aaPredicted RBP14.13□□□□□ -0.15
CCDC50-201ENST00000392455 FKBPLQ9UIM3 349 aa14.13□□□□□ -0.15
CCDC50-201ENST00000392455 A0A0D9SG52 128 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 INPPL1O15357 1258 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 MMP2P08253 660 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 UBBP0CG47 229 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 UBCP0CG48 685 aaKnown RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 NFYBP25208 207 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 RPS27AP62979 156 aaKnown RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 UBA52P62987 128 aaKnown RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 ZNF318Q5VUA4 2279 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 PDE12Q6L8Q7 609 aaKnown RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 ZNF704Q6ZNC4 412 aaPredicted RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 OR52A5Q9H2C5 316 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 STXBP5LQ9Y2K9 1186 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 LCKP06239 509 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 RAB11AP62491 216 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 FLYWCH1Q4VC44 716 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 PDLIM3Q53GG5 364 aaPredicted RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 TAC4Q86UU9 113 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 C1orf127Q8N9H9 656 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 PYCR2Q96C36 320 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 SNX18Q96RF0 628 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 CGREF1Q99674 301 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 EBF3Q9H4W6 596 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 EDDM13A0A1B0GTR0 161 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 FOXO6A8MYZ6 492 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 DUSP11O75319 330 aaKnown RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 ZNF254O75437 659 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 OR1S1Q8NH92 325 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 ZFAND1Q8TCF1 268 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 FAM122AQ96E09 287 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 FGFBP2Q9BYJ0 223 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 CCM2LQ9NUG4 571 aaPredicted RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 RIPK3Q9Y572 518 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 TAF9Q16594 264 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 SFXN5Q8TD22 340 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 SLC2A1P11166 492 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 HNRNPH3P31942 346 aaKnown RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 CDKN1CP49918 316 aaPredicted RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 DRICH1Q6PGQ1 229 aaPredicted RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 TCTE3Q8IZS6 198 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 FNDC9Q8TBE3 224 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 SETD7Q8WTS6 366 aaKnown RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 WDR77Q9BQA1 342 aaPredicted RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 CWH43Q9H720 699 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 CPNE5Q9HCH3 593 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 FBXW11Q9UKB1 542 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 SHOX2O60902 331 aaPredicted RBP14.12□□□□□ -0.15
CCDC50-201ENST00000392455 BCHEP06276 602 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 ALPIP09923 528 aa14.12□□□□□ -0.15
CCDC50-201ENST00000392455 SHFQ7M4L6 423 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms