RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 KIRREL3Q8IZU9 778 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 GHDCQ8N2G8 530 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 CPSF7Q8N684 471 aaKnown RBP11.71□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF615Q8N8J6 731 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF441Q8N8Z8 693 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 C16orf52Q8NHV5 167 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 PPP1R14CQ8TAE6 165 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 CNRIP1Q96F85 164 aaPredicted RBP11.71□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF764Q96H86 408 aaPredicted RBP11.71□□□□□ -0.53
GGPS1-203ENST00000391855 CCT7Q99832 543 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 CENPHQ9H3R5 247 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 LRTM1Q9HBL6 345 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 TNFRSF12AQ9NP84 129 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 C1orf109Q9NX04 203 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 HEY2Q9UBP5 337 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 PRODH2Q9UF12 536 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 OSGIN2Q9Y236 505 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 CCL27Q9Y4X3 112 aa11.71□□□□□ -0.53
GGPS1-203ENST00000391855 SPENQ96T58 3664 aaKnown RBP11.71□□□□□ -0.54
GGPS1-203ENST00000391855 TFECO14948 347 aaPredicted RBP11.7□□□□□ -0.54
GGPS1-203ENST00000391855 SEMA7AO75326 666 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 SEC22BO75396 215 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 ZWINTO95229 277 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 P04436 131 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 CHRNGP07510 517 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 FBXO45P0C2W1 286 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 CT62P0C5K7 136 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 DDX5P17844 614 aaKnown RBP11.7□□□□□ -0.54
GGPS1-203ENST00000391855 CASP6P55212 293 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 KCNK10P57789 538 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 DCAF7P61962 342 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 RPP38P78345 283 aaKnown RBP11.7□□□□□ -0.54
GGPS1-203ENST00000391855 C2orf80Q0P641 193 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 ZNF791Q3KP31 576 aaPredicted RBP11.7□□□□□ -0.54
GGPS1-203ENST00000391855 TBCELQ5QJ74 424 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 FAM71E1Q6IPT2 247 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 MTFR2Q6P444 385 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 EXOC3L1Q86VI1 746 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 NUDCD3Q8IVD9 361 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 MMP21Q8N119 569 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 OR2M7Q8NG81 312 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 OR6Y1Q8NGX8 325 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 CDC26Q8NHZ8 85 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.7□□□□□ -0.544e-13■□□□□ 10.9
GGPS1-203ENST00000391855 PAQR8Q8TEZ7 354 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 TWIST2Q8WVJ9 160 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 EXOSC8Q96B26 276 aaKnown RBP11.7□□□□□ -0.54
GGPS1-203ENST00000391855 CTHRC1Q96CG8 243 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 MAGED4Q96JG8 741 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 FCRL1Q96LA6 429 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 FAM173AQ9BQD7 235 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 SLC35C2Q9NQQ7 365 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 TAS2R7Q9NYW3 318 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 CNIH4Q9P003 139 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 ZNF639Q9UID6 485 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 ERRFI1Q9UJM3 462 aaPredicted RBP11.7□□□□□ -0.54
GGPS1-203ENST00000391855 FIS1Q9Y3D6 152 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 TRAF6Q9Y4K3 522 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 POLR3HQ9Y535 204 aaPredicted RBP11.7□□□□□ -0.54
GGPS1-203ENST00000391855 DNAJC15Q9Y5T4 150 aa11.7□□□□□ -0.54
GGPS1-203ENST00000391855 RP1L1Q8IWN7 2480 aaPredicted RBP11.7□□□□□ -0.54
GGPS1-203ENST00000391855 TMEM114B3SHH9 223 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 NPIPA5E9PKD4 350 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 TP53I11O14683 189 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 ASNA1O43681 348 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 ZNF354AO60765 605 aaPredicted RBP11.69□□□□□ -0.54
GGPS1-203ENST00000391855 SERPINE1P05121 402 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 IFI6P09912 130 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 NAGAP17050 411 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 S1PR1P21453 382 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 CNR1P21554 472 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 GPX3P22352 226 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 MAPK1P28482 360 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 NTSP30990 170 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 MPIP34949 423 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 GPR85P60893 370 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 MGAT2Q10469 447 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 KIAA0040Q15053 153 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 RPS6KA2Q15349 733 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 NTRK2Q16620 822 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 ZNF750Q32MQ0 723 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 ZNF628Q5EBL2 1059 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 SH2D4BQ5SQS7 431 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 SLC22A10Q63ZE4 541 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 PAOXQ6QHF9 649 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 LYPD8Q6UX82 237 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 ZCCHC23Q6ZST2 131 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 FAM47EQ6ZV65 393 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 DDIASQ8IXT1 998 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 FAM9CQ8IZT9 166 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 DOK4Q8TEW6 326 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 RELTQ969Z4 430 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 HSPBAP1Q96EW2 488 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 PPP3R2Q96LZ3 170 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 BBS4Q96RK4 519 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 SECISBP2Q96T21 854 aaKnown RBP11.69□□□□□ -0.54
GGPS1-203ENST00000391855 SUCOQ9UBS9 1254 aaKnown RBP11.69□□□□□ -0.54
GGPS1-203ENST00000391855 BCAP29Q9UHQ4 241 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 NPIPA1Q9UND3 350 aa11.69□□□□□ -0.54
GGPS1-203ENST00000391855 POLEQ07864 2286 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms