RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 FAM76BQ5HYJ3 339 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 AP1ARQ63HQ0 302 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 SNRNP48Q6IEG0 339 aaKnown RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 TRIM65Q6PJ69 517 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 CYP4V2Q6ZWL3 525 aaPredicted RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 TRMT1LQ7Z2T5 733 aaKnown RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 TPRA1Q86W33 373 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 ADHFE1Q8IWW8 467 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 TMEM123Q8N131 208 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 OR6M1Q8NGM8 313 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 LKAAEAR1Q8TD35 194 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 GLYATL2Q8WU03 294 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 OR1F2PQ96R84 312 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 SIGLEC11Q96RL6 698 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 SPATA16Q9BXB7 569 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 SLC26A1Q9H2B4 701 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 FAM124BQ9H5Z6 455 aaPredicted RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 RNF121Q9H920 327 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 ZNF160Q9HCG1 818 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 MRPL22Q9NWU5 206 aaKnown RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 QPCTLQ9NXS2 382 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 PPP4R1LQ9P1A2 415 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 MRTO4Q9UKD2 239 aaKnown RBP5.88□□□□□ -1.47
TRAV35-201ENST00000390462 NCKAP1Q9Y2A7 1128 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 ZNF536O15090 1300 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 IL16Q14005 1332 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 CPDO75976 1380 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 PKD1L3Q7Z443 1732 aa5.88□□□□□ -1.47
TRAV35-201ENST00000390462 ATP6AP2A0A1C7CYW4 349 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 GOLGA6L9A6NEM1 432 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 C15orf62A8K5M9 175 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 PSMD11O00231 422 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 RFXAPO00287 272 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 KRT86O43790 486 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 TIMM8AO60220 97 aaPredicted RBP5.87□□□□□ -1.47
TRAV35-201ENST00000390462 RNASEH1O60930 286 aaKnown RBP5.87□□□□□ -1.47
TRAV35-201ENST00000390462 NDUFS7O75251 213 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 WISP2O76076 250 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 CAVIN2O95810 425 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 TGM6O95932 706 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 STAG3L2P0CL84 134 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 CHRNB2P17787 502 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 CYP2B6P20813 491 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 PTNP21246 168 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 MAGEA8P43361 318 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 ACADSBP45954 432 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 CCT3P49368 545 aaKnown RBP5.87□□□□□ -1.47
TRAV35-201ENST00000390462 CSNK1EP49674 416 aaKnown RBP5.87□□□□□ -1.47
TRAV35-201ENST00000390462 CTAG1AP78358 180 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 PPIL2Q13356 520 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 XRCC4Q13426 336 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 COTL1Q14019 142 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 ALKBH6Q3KRA9 238 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 FAM153CQ494X1 144 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 LINC01620Q4KN68 170 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 PHLDA2Q53GA4 152 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 PLCXD3Q63HM9 321 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 C6orf89Q6UWU4 347 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 FAM57BQ71RH2 274 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 GOLGA7Q7Z5G4 137 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 VTCN1Q7Z7D3 282 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 PALB2Q86YC2 1186 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 GPSM1Q86YR5 675 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 MUC20Q8N307 709 aaPredicted RBP5.87□□□□□ -1.47
TRAV35-201ENST00000390462 CNBD1Q8NA66 436 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 M1APQ8TC57 530 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 TMEM37Q8WXS4 190 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 SGK3Q96BR1 496 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 TSNARE1Q96NA8 513 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 INPP4AQ96PE3 977 aaPredicted RBP5.87□□□□□ -1.47
TRAV35-201ENST00000390462 KRT12Q99456 494 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 S1PR3Q99500 378 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 MAP3K3Q99759 626 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 ARRDC1-AS1Q9H2J1 176 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 DHX33Q9H6R0 707 aaKnown RBP5.87□□□□□ -1.47
TRAV35-201ENST00000390462 KAT8Q9H7Z6 458 aaKnown RBP5.87□□□□□ -1.47
TRAV35-201ENST00000390462 TLE6Q9H808 572 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 ANKRA2Q9H9E1 313 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 TREM1Q9NP99 234 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 UFSP2Q9NUQ7 469 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 SMOXQ9NWM0 555 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 SLC12A6Q9UHW9 1150 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 DAPK2Q9UIK4 370 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 PILRAQ9UKJ1 303 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 PAM16Q9Y3D7 125 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 ETV7Q9Y603 341 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 QRICH2Q9H0J4 1663 aa5.87□□□□□ -1.47
TRAV35-201ENST00000390462 DOT1LQ8TEK3 1739 aa5.86□□□□□ -1.47
TRAV35-201ENST00000390462 ABCC6O95255 1503 aa5.86□□□□□ -1.47
TRAV35-201ENST00000390462 SPATA31E1Q6ZUB1 1445 aa5.86□□□□□ -1.47
TRAV35-201ENST00000390462 A0A0J9YYE9 177 aa5.86□□□□□ -1.47
TRAV35-201ENST00000390462 OR6C75A6NL08 312 aa5.86□□□□□ -1.47
TRAV35-201ENST00000390462 TARM1B6A8C7 271 aa5.86□□□□□ -1.47
TRAV35-201ENST00000390462 TMEM178BH3BS89 294 aa5.86□□□□□ -1.47
TRAV35-201ENST00000390462 GAPDHSO14556 408 aaPredicted RBP5.86□□□□□ -1.47
TRAV35-201ENST00000390462 CHMP2AO43633 222 aa5.86□□□□□ -1.47
TRAV35-201ENST00000390462 CLPXO76031 633 aa5.86□□□□□ -1.47
TRAV35-201ENST00000390462 SCGNO76038 276 aa5.86□□□□□ -1.47
TRAV35-201ENST00000390462 JTBO76095 146 aa5.86□□□□□ -1.47
TRAV35-201ENST00000390462 TRBC1P01850 177 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms