RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CARM1Q86X55 608 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 MISPQ8IVT2 679 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 CERS5Q8N5B7 392 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZNF781Q8N8C0 355 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 BEST4Q8NFU0 473 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 OR1B1Q8NGR6 318 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 NCLNQ969V3 563 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 MRPL38Q96DV4 380 aaKnown RBP4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 IWS1Q96ST2 819 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 CHCHD5Q9BSY4 110 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 WRAP53Q9BUR4 548 aaKnown RBP4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 ERVK-6Q9BXR3 956 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 LIME1Q9H400 295 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 CIDEBQ9UHD4 219 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 RARRES3Q9UL19 164 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 AP1M2Q9Y6Q5 423 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 RAD54L2Q9Y4B4 1467 aa4.49□□□□□ -1.69
RNU6-40P-201ENST00000384254 H7C423 109 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 CYB561D2O14569 222 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 EI24O14681 340 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 SNAP91O60641 907 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 HSD17B1P14061 328 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 HILS1P60008 231 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 ELAVL2Q12926 359 aaKnown RBP4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 BNIP1Q12981 228 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 PARP6Q2NL67 630 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 UNC50Q53HI1 259 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 RHBDD2Q6NTF9 364 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 AFTPHQ6ULP2 937 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 CENPSQ8N2Z9 138 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 WDR36Q8NI36 951 aaKnown RBP4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 CHPT1Q8WUD6 406 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 SELENOMQ8WWX9 145 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 MOCOSQ96EN8 888 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 C19orf43Q9BQ61 176 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 LRRC61Q9BV99 259 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 RBM24Q9BX46 236 aaKnown RBP4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 OCR1Q9BZK8 76 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 ACTR8Q9H981 624 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 PANK3Q9H999 370 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 Q9HAA7 133 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 YAE1D1Q9NRH1 226 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 TAS2R16Q9NYV7 291 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 GTSE1Q9NYZ3 720 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 MOB4Q9Y3A3 225 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 U3KQV3 271 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 KIF26BQ2KJY2 2108 aa4.48□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZMYM6O95789 1325 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 TRBV5-4A0A0C4DH59 114 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 A0A0J9YVX5 310 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 ANKRD30BLA7E2S9 258 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 K7ERI5 159 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 SOCS3O14543 225 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 ADAM12O43184 909 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 TOM1L1O75674 476 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 SORBS2O94875 1100 aaKnown RBP4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 IFNB1P01574 187 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 HEXBP07686 556 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 FCGR3AP08637 254 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 TNNI3P19429 210 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 CALRP27797 417 aaKnown RBP4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 SPRP35270 261 aaPredicted RBP4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 SLC1A4P43007 532 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 MS4A2Q01362 244 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 HSF2Q03933 536 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 SRYQ05066 204 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZNF528Q3MIS6 628 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 POM121L1PQ3SYA9 428 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 DNAJC21Q5F1R6 531 aaKnown RBP4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 DOK6Q6PKX4 331 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 MOB2Q70IA6 237 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 AMZ2Q86W34 360 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 BCORP1Q8N888 145 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 OR4F5Q8NH21 305 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 MIPOL1Q8TD10 442 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 GIPC3Q8TF64 312 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 NABP1Q96AH0 204 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 RBM18Q96H35 190 aaKnown RBP4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 C18orf12Q96KH6 178 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 CAPNS2Q96L46 248 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 ZNF597Q96LX8 424 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 CPXM1Q96SM3 734 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 CABLES2Q9BTV7 478 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 FICDQ9BVA6 458 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 RAB11FIP5Q9BXF6 653 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 LRRCC1Q9C099 1032 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 PNNQ9H307 717 aaKnown RBP4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 ECT2Q9H8V3 914 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 GDAP2Q9NXN4 497 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 MDFICQ9P1T7 246 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 THAP10Q9P2Z0 257 aaPredicted RBP4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 ASIC3Q9UHC3 531 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 SH3BGRL2Q9UJC5 107 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 IKZF3Q9UKT9 509 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 FBXO7Q9Y3I1 522 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 CPQQ9Y646 472 aa4.47□□□□□ -1.69
RNU6-40P-201ENST00000384254 ABCC4O15439 1325 aa4.46□□□□□ -1.69
RNU6-40P-201ENST00000384254 PTPRUQ92729 1446 aa4.46□□□□□ -1.69
RNU6-40P-201ENST00000384254 NPIPA5A0A0B4J1W7 369 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms