RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 SIX3O95343 332 aaPredicted RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 PTBP3O95758 552 aaKnown RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 MLYCDO95822 493 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 STSP08842 583 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 ZDHHC11BP0C7U3 371 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 SLC2A2P11168 524 aaPredicted RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 RNH1P13489 461 aaKnown RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 UGT2B7P16662 529 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 DNASE1P24855 282 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 SH3BP2P78314 561 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 PPP1R8Q12972 351 aaKnown RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 NPRL3Q12980 569 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 CLN3Q13286 438 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 ZNF460Q14592 562 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 SLC10A6Q3KNW5 377 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 UNC50Q53HI1 259 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 C9orf152Q5JTZ5 239 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 THEM4Q5T1C6 240 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 MARC1Q5VT66 337 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 REC114Q7Z4M0 266 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 Q8N402 240 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 B3GALNT2Q8NCR0 500 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 OR2T11Q8NH01 316 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 TMEM163Q8TC26 289 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 WNT8BQ93098 351 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 HBEGFQ99075 208 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 SPSB2Q99619 263 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 MGLLQ99685 303 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 MESP1Q9BRJ9 268 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 PRKD2Q9BZL6 878 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 ABCG8Q9H221 673 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 ALG9Q9H6U8 611 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 KLHL1Q9NR64 748 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 TAS2R16Q9NYV7 291 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 ZIM2Q9NZV7 527 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 STYXL1Q9Y6J8 313 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 A0A0G2JPF8 293 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 FAM240BA0A1B0GVZ2 78 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 C2CD4BA6NLJ0 364 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 HNRNPCL3B7ZW38 293 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 KPNA3O00505 521 aaPredicted RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 PIP5K1BO14986 540 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 ICOSLGO75144 302 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 SLC34A2O95436 690 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 PRAMEF1O95521 474 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 SERPIND1P05546 499 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 HNRNPCL4P0DMR1 293 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 DIO3P55073 304 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 FOXA1P55317 472 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 SNRPEP62304 92 aaKnown RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 PWP1Q13610 501 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 LRRC32Q14392 662 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 CTXN3Q4LDR2 81 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 SLC39A12Q504Y0 691 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 AVPI1Q5T686 147 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 FAM198BQ6UWH4 519 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 FGD2Q7Z6J4 655 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 NAGSQ8N159 534 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 ZNF454Q8N9F8 522 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 PROKR1Q8TCW9 393 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 C2CD4CQ8TF44 421 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 MARS2Q96GW9 593 aaKnown RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 PIWIL1Q96J94 861 aaKnown RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 ADAM2Q99965 735 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 VRK1Q99986 396 aaPredicted RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 C11orf84Q9BUA3 381 aaPredicted RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 MRPL37Q9BZE1 423 aaKnown RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 OR51J1Q9H342 316 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 FN3KQ9H479 309 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 IKZF5Q9H5V7 419 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 C12orf49Q9H741 205 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 KRT84Q9NSB2 600 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 CNOT2Q9NZN8 540 aaKnown RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 FBXL21Q9UKT6 434 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 PLEKHM1Q9Y4G2 1056 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 TTC28Q96AY4 2481 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 SHROOM3Q8TF72 1996 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 A0A087X1B8 175 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 COLCA2A8K830 154 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 MFSD11O43934 449 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 CDC123O75794 336 aaPredicted RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 CHRM5P08912 532 aaPredicted RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 OR8U8P0C7N1 319 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 AGAP20933 346 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 ARL2P36404 184 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 PMELP40967 661 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 RAD52P43351 418 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 SELENOPP49908 381 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 OAZ1P54368 228 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 FKBP1AP62942 108 aaKnown RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 ERVK-25P63136 954 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 GSG1Q2KHT4 349 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 RNF219Q5W0B1 726 aaPredicted RBP6.25□□□□□ -1.41
RIPK1-202ENST00000380409 NCBP2-AS2Q69YL0 99 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 VITQ6UXI7 678 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 LBX2Q6XYB7 198 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 ZNF730Q6ZMV8 503 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 NUDT18Q6ZVK8 323 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 C16orf59Q7L2K0 433 aa6.25□□□□□ -1.41
RIPK1-202ENST00000380409 CACUL1Q86Y37 369 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms