RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 NR2F1P10589 423 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 FMO3P31513 532 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 RPS26P62854 115 aaKnown RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 TDGQ13569 410 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 KIR2DS5Q14953 304 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 MAPK11Q15759 364 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 RPS26P11Q5JNZ5 115 aaPredicted RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 TPRG1LQ5T0D9 272 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 KIAA0895LQ68EN5 471 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 FAM180BQ6P0A1 224 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 VN1R4Q7Z5H5 301 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ANKRD13BQ86YJ7 626 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 FAM20CQ8IXL6 584 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 RBM12BQ8IXT5 1001 aaKnown RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ENTHD1Q8IYW4 607 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ZNF655Q8N720 491 aaPredicted RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 CAMKVQ8NCB2 501 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 FLVCR1-AS1Q8TAF5 88 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 GPBAR1Q8TDU6 330 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 FAM3CQ92520 227 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 FCGR1BQ92637 280 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 RAB8BQ92930 207 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 OR2A14Q96R47 310 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 SERINC2Q96SA4 455 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 CCDC90BQ9GZT6 254 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 SERHL2Q9H4I8 314 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 TRIM45Q9H8W5 580 aaPredicted RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 MS4A12Q9NXJ0 267 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 TRPC4Q9UBN4 977 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 WARS2Q9UGM6 360 aaKnown RBP9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 FBXW2Q9UKT8 454 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ACAD8Q9UKU7 415 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 DUSP12Q9UNI6 340 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 MGAT4BQ9UQ53 548 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 RNF6Q9Y252 685 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 CA5BQ9Y2D0 317 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC9A8Q9Y2E8 581 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 SNX11Q9Y5W9 270 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 ATRXP46100 2492 aa9.88□□□□□ -0.83
POLR2J3-201ENST00000379340 FANCMQ8IYD8 2048 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 C2orf74A8MZ97 194 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 J3KTA2 159 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 SCAMP1O15126 338 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 AXIN1O15169 862 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 WBP4O75554 376 aaKnown RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 AGR2O95994 175 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 H1F0P07305 194 aaKnown RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 DCNP07585 359 aaKnown RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 SP9P0CG40 484 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 SMIM10L1P0DMW3 83 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 UGT2B7P16662 529 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 KRT20P35900 424 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 DGKEP52429 567 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 CDC42P60953 191 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 RAB8AP61006 207 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 TNFRSF17Q02223 184 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 EMX1Q04741 257 aaPredicted RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 NFATC3Q12968 1075 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 DCTN2Q13561 401 aaKnown RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 MANEAQ5SRI9 462 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 DCST1Q5T197 706 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 SYT6Q5T7P8 510 aaPredicted RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 FIGLAQ6QHK4 219 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 Q6ZSR6 202 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 ABHD13Q7L211 337 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 SZRD1Q7Z422 152 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 CCDC71Q8IV32 467 aaPredicted RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC44A2Q8IWA5 706 aaPredicted RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 SUMF1Q8NBK3 374 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 GPR32P1Q8NGA4 272 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 OR52J3Q8NH60 311 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 RHOXF1Q8NHV9 184 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 FAM81AQ8TBF8 368 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 UTP15Q8TED0 518 aaKnown RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 FAR1Q8WVX9 515 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 XAGE5Q8WWM1 108 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 MYDGFQ969H8 173 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 CNRIP1Q96F85 164 aaPredicted RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 SMIM10Q96HG1 83 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 COL21A1Q96P44 957 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 TREX2Q9BQ50 279 aaPredicted RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 LIN28AQ9H9Z2 209 aaKnown RBP9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 ACTR10Q9NZ32 417 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 ERVK-18Q9QC07 812 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 ENPP5Q9UJA9 477 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 CA14Q9ULX7 337 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 LIPT1Q9Y234 373 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
POLR2J3-201ENST00000379340 SNRNP200O75643 2136 aaKnown RBP9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 DUXAA6NLW8 204 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 SYT5O00445 386 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 PCDH17O14917 1159 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 PGRMC2O15173 223 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 ZSCAN9O15535 394 aaPredicted RBP9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 B3GALT2O43825 422 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 PCDHGA12O60330 932 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 MT-ND2P03891 347 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 IFI6P09912 130 aa9.86□□□□□ -0.83
POLR2J3-201ENST00000379340 ZNF888P0CJ79 500 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms