RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 TRIM46Q7Z4K8 759 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 FGD2Q7Z6J4 655 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 CCDC116Q8IYX3 515 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 GHDCQ8N2G8 530 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 MREGQ8N565 214 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 ZNF441Q8N8Z8 693 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 GOLM1Q8NBJ4 401 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 TCP10LQ8TDR4 215 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 ADIPOR1Q96A54 375 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 ZNF681Q96N22 645 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 MECRQ9BV79 373 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 BRINP2Q9C0B6 783 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 SACM1LQ9NTJ5 587 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 SIRT5Q9NXA8 310 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 MAT2BQ9NZL9 334 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 MID2Q9UJV3 735 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 TINAGQ9UJW2 476 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 UTS2RQ9UKP6 389 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 ZNF780BQ9Y6R6 833 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 DOPEY1Q5JWR5 2465 aa13.16□□□□□ -0.3
CLCN6-203ENST00000376490 PHF3Q92576 2039 aaKnown RBP13.15□□□□□ -0.3
CLCN6-203ENST00000376490 A0A1B0GTH9 108 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 FAM166BA8MTA8 275 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 P04436 131 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 ATP1B1P05026 303 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 DRD2P14416 443 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 DNASE1L1P49184 302 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 PPIAP62937 165 aaKnown RBP13.15□□□□□ -0.3
CLCN6-203ENST00000376490 PLGLB1Q02325 96 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 C2orf80Q0P641 193 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 EXOSC7Q15024 291 aaKnown RBP13.15□□□□□ -0.3
CLCN6-203ENST00000376490 LTB4RQ15722 352 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 IMPG1Q17R60 797 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 PRSS53Q2L4Q9 553 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 TRMT12Q53H54 448 aaKnown RBP13.15□□□□□ -0.3
CLCN6-203ENST00000376490 C6orf163Q5TEZ5 329 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 HLA-DQA1Q5Y7H0 255 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 Q6ZPB1 254 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-203ENST00000376490 FAM47EQ6ZV65 393 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 MAMDC2Q7Z304 686 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-203ENST00000376490 FAM13CQ8NE31 585 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 OR7G1Q8NGA0 311 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 OR5M3Q8NGP4 307 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 TP53INP1Q96A56 240 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 EXOSC8Q96B26 276 aaKnown RBP13.15□□□□□ -0.3
CLCN6-203ENST00000376490 ZBTB9Q96C00 473 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 SPACA9Q96E40 222 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-203ENST00000376490 MAGED4Q96JG8 741 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 FAM173AQ9BQD7 235 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 TMEM109Q9BVC6 243 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 SH2D2AQ9NP31 389 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 RRAGDQ9NQL2 400 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-203ENST00000376490 BCAP29Q9UHQ4 241 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 ZNF639Q9UID6 485 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 RAB21Q9UL25 225 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 DTX4Q9Y2E6 619 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 FIS1Q9Y3D6 152 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 CCL27Q9Y4X3 112 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 PTGDR2Q9Y5Y4 395 aa13.15□□□□□ -0.3
CLCN6-203ENST00000376490 AZIN1O14977 448 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 CDC40O60508 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLCN6-203ENST00000376490 FBXO45P0C2W1 286 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 ABOP16442 354 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 CASP6P55212 293 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 FOXO1Q12778 655 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 DUSP8Q13202 625 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 HEPACAMQ14CZ8 416 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 BNC2Q6ZN30 1099 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-203ENST00000376490 TAGAPQ8N103 731 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 LRRC25Q8N386 305 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-203ENST00000376490 VWA5B2Q8N398 1253 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 OR10G3Q8NGC4 313 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 PAQR8Q8TEZ7 354 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 CTHRC1Q96CG8 243 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 CCDC120Q96HB5 630 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 SMC6Q96SB8 1091 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 TTTY12Q9BZ98 90 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 ANKRA2Q9H9E1 313 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 PFDN4Q9NQP4 134 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 TUBA8Q9NY65 449 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-203ENST00000376490 POLR3HQ9Y535 204 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-203ENST00000376490 NPFFR2Q9Y5X5 522 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 ARHGAP21Q5T5U3 1957 aa13.14□□□□□ -0.31
CLCN6-203ENST00000376490 NUP214P35658 2090 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-203ENST00000376490 PCNX3Q9H6A9 2034 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 SEC22BO75396 215 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 GLSO94925 669 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-203ENST00000376490 LRATO95237 230 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 CBX7O95931 251 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 CHRNGP07510 517 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 PCSK2P16519 638 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 GPX3P22352 226 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 MRPS35P82673 323 aaKnown RBP13.13□□□□□ -0.31
CLCN6-203ENST00000376490 ZNF844Q08AG5 666 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 KIAA0040Q15053 153 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 NTRK2Q16620 822 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 KRT71Q3SY84 523 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 ARL13AQ5H913 290 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-203ENST00000376490 PRAMEF20Q5VT98 475 aa13.13□□□□□ -0.31
CLCN6-203ENST00000376490 NOXRED1Q6NXP6 359 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms