RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 ADRB3P13945 408 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 PTH2RP49190 550 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 AKR1C2P52895 323 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 OR4D1Q15615 310 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 PLEKHS1Q5SXH7 462 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 ZNF367Q7RTV3 350 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 C6orf120Q7Z4R8 191 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 CIDECQ96AQ7 238 aaPredicted RBP13.09□□□□□ -0.31
COL4A1-201ENST00000375820 PRR11Q96HE9 360 aaPredicted RBP13.09□□□□□ -0.31
COL4A1-201ENST00000375820 NXF5Q9H1B4 397 aaKnown RBP13.09□□□□□ -0.31
COL4A1-201ENST00000375820 NELFAQ9H3P2 528 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 PAQR5Q9NXK6 330 aaPredicted RBP13.09□□□□□ -0.31
COL4A1-201ENST00000375820 HAO2Q9NYQ3 351 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 SEC14L4Q9UDX3 406 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 H3BML4 177 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 SOD2P04179 222 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 VIPR2P41587 438 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 RIDAP52758 137 aaKnown RBP13.09□□□□□ -0.31
COL4A1-201ENST00000375820 RAB30Q15771 203 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 PIGGQ5H8A4 983 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 BCL2L15Q5TBC7 163 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 TSPAN33Q86UF1 283 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 HS3ST5Q8IZT8 346 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 GPR137CQ8N3F9 429 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 ARL14Q8N4G2 192 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 C17orf50Q8WW18 174 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 GPR62Q9BZJ7 368 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 PCDHB16Q9NRJ7 776 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 PRODH2Q9UF12 536 aa13.09□□□□□ -0.31
COL4A1-201ENST00000375820 APOBEC3BQ9UH17 382 aaKnown RBP13.09□□□□□ -0.31
COL4A1-201ENST00000375820 MT-ND2P03891 347 aa13.08□□□□□ -0.31
COL4A1-201ENST00000375820 PET100P0DJ07 73 aa13.08□□□□□ -0.31
COL4A1-201ENST00000375820 NFATC4Q14934 902 aa13.08□□□□□ -0.31
COL4A1-201ENST00000375820 RAB6CQ53S08 254 aa13.08□□□□□ -0.31
COL4A1-201ENST00000375820 KCTD18Q6PI47 426 aaPredicted RBP13.08□□□□□ -0.31
COL4A1-201ENST00000375820 PLEKHG7Q6ZR37 379 aa13.08□□□□□ -0.31
COL4A1-201ENST00000375820 LIX1LQ8IVB5 337 aa13.08□□□□□ -0.31
COL4A1-201ENST00000375820 OR5P2Q8WZ92 322 aa13.08□□□□□ -0.31
COL4A1-201ENST00000375820 RAB6CQ9H0N0 254 aa13.08□□□□□ -0.31
COL4A1-201ENST00000375820 SRRDQ9UH36 339 aa13.08□□□□□ -0.31
COL4A1-201ENST00000375820 BOLA2-SMG1P6H3BVE0 249 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 EDN3P14138 238 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 TIA1P31483 386 aaKnown RBP eCLIP13.08□□□□□ -0.32
COL4A1-201ENST00000375820 AQP2P41181 271 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 HUS1BQ8NHY5 278 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 ZNF317Q96PQ6 595 aaPredicted RBP13.08□□□□□ -0.32
COL4A1-201ENST00000375820 PDE7BQ9NP56 450 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 LSM5Q9Y4Y9 91 aaKnown RBP13.08□□□□□ -0.32
COL4A1-201ENST00000375820 EMC8O43402 210 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 PRICKLE3O43900 615 aaPredicted RBP13.08□□□□□ -0.32
COL4A1-201ENST00000375820 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
COL4A1-201ENST00000375820 PPP1R3DO95685 299 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 CSF2RAP15509 400 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 ITGB8P26012 769 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 MALLQ13021 153 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 OR4C11Q6IEV9 310 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 OR52B6Q8NGF0 335 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 NPY6RQ99463 290 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 SAV1Q9H4B6 383 aaPredicted RBP13.08□□□□□ -0.32
COL4A1-201ENST00000375820 HTR3BO95264 441 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 LIPJQ5W064 366 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 OR14L1PQ8NHC6 308 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 HOXB13Q92826 284 aaPredicted RBP13.08□□□□□ -0.32
COL4A1-201ENST00000375820 SIGLEC10Q96LC7 697 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 MACROD1Q9BQ69 325 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 CCDC106Q9BWC9 280 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 PAPOLGQ9BWT3 736 aaKnown RBP13.08□□□□□ -0.32
COL4A1-201ENST00000375820 YTHDF1Q9BYJ9 559 aaKnown RBP13.08□□□□□ -0.32
COL4A1-201ENST00000375820 PPIL3Q9H2H8 161 aaKnown RBP13.08□□□□□ -0.32
COL4A1-201ENST00000375820 KCNK13Q9HB14 408 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 RNF215Q9Y6U7 377 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 NPIPA5A0A0B4J1W7 369 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 HEPACAM2A8MVW5 462 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 NPIPA7E9PJI5 369 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 FAAHO00519 579 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 NPIPA8P0DM63 369 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 NSDHLQ15738 373 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 FAM189A2Q15884 450 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 TP53INP2Q8IXH6 220 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 RPLP0P6Q8NHW5 317 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 WDR92Q96MX6 357 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 BOCQ9BWV1 1114 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 ACSL5Q9ULC5 683 aa13.08□□□□□ -0.32
COL4A1-201ENST00000375820 GOLGA4Q13439 2230 aaKnown RBP13.08□□□□□ -0.32
COL4A1-201ENST00000375820 LIPCP11150 499 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 ATP6AP1Q15904 470 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 UPP1Q16831 310 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 UNC50Q53HI1 259 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 OR10T2Q8NGX3 314 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 SLCO3A1Q9UIG8 710 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 RFPL1O75677 317 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 THEGLP0DJG4 465 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 TMEM225BP0DP42 221 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 GNB3P16520 340 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 PXNP49023 591 aaPredicted RBP13.07□□□□□ -0.32
COL4A1-201ENST00000375820 DOC2AQ14183 400 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 NPY5RQ15761 445 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 STK35Q8TDR2 534 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 SGTBQ96EQ0 304 aa13.07□□□□□ -0.32
COL4A1-201ENST00000375820 UHRF1Q96T88 793 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms