RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 METAP1P53582 386 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 IL18R1Q13478 541 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 KIR2DS5Q14953 304 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 CHST4Q8NCG5 386 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 ISL2Q96A47 359 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 C12orf43Q96C57 262 aaKnown RBP17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 EPYCQ99645 322 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 LRIT1Q9P2V4 623 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 ERVK-18Q9QC07 812 aa17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 C19orf25Q9UFG5 118 aaPredicted RBP17.04■□□□□ 0.32
PTPDC1-202ENST00000375360 ARNTLO00327 626 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 CDC40O60508 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 ABCB7O75027 752 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 GCGRP47871 477 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 ACVR1Q04771 509 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 CRYZQ08257 329 aaKnown RBP17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 PTGES3Q15185 160 aaKnown RBP17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 LCN1P1Q5VSP4 162 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 LILRA6Q6PI73 481 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 ZNF773Q6PK81 442 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 GPAT4Q86UL3 456 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 LHFPL3Q86UP9 236 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 MARCH9Q86YJ5 346 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 FUNDC1Q8IVP5 155 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 NEK7Q8TDX7 302 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 KCNN2Q9H2S1 579 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 PLEKHA1Q9HB21 404 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 WBP11Q9Y2W2 641 aaKnown RBP17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 GPC6Q9Y625 555 aaPredicted RBP17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 J3QRK9 145 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 ZNF33BQ06732 778 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 FAM160A2Q8N612 972 aaPredicted RBP17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 ANKFN1Q8N957 763 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 OR9A4Q8NGU2 314 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 EZH1Q92800 747 aaPredicted RBP17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 CLMPQ9H6B4 373 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 NEK6Q9HC98 313 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 C2orf92A0A1B0GVN3 265 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 GPR89AB7ZAQ6 455 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 GPR89BP0CG08 455 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 ZNF182P17025 639 aaPredicted RBP17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 CPOXP36551 454 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 TPMTP51580 245 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 CCNJQ5T5M9 372 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 ZCCHC12Q6PEW1 402 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 OR13H1Q8NG92 308 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 C9orf43Q8TAL5 461 aaPredicted RBP17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 CREB3L4Q8TEY5 395 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 ERMAPQ96PL5 475 aaPredicted RBP17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 KLF15Q9UIH9 416 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 ENPP4Q9Y6X5 453 aa17.03■□□□□ 0.32
PTPDC1-202ENST00000375360 MAGEA12P43365 314 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 DUSP3P51452 185 aaPredicted RBP17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 DCDC1P59894 354 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 VBP1P61758 197 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 CCINQ13939 588 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 TMEM44Q2T9K0 475 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 A0A0J9YY10 115 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 SLCO2B1O94956 709 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 CELP19835 753 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 ZSWIM9Q86XI8 627 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 SDR16C5Q8N3Y7 309 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 BARD1Q99728 777 aaKnown RBP17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 RPP25Q9BUL9 199 aaKnown RBP17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 HDAC8Q9BY41 377 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 TCF7L1Q9HCS4 588 aa17.02■□□□□ 0.32
PTPDC1-202ENST00000375360 KLHL18O94889 574 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 BMP2P12643 396 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 NPPBP16860 134 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 SDC2P34741 201 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 XCR1P46094 333 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 GBX2P52951 348 aaPredicted RBP17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 OR12D2P58182 307 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 TCTE1Q5JU00 501 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 ZNF550Q7Z398 422 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 PRR22Q8IZ63 422 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 OSTF1Q92882 214 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 RNASET2O00584 256 aaKnown RBP17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 CD2P06729 351 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 STSP08842 583 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 CRISP1P54107 249 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 SELENOWP63302 87 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 SMU1Q2TAY7 513 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 G6PC3Q9BUM1 346 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 ITPAQ9BY32 194 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 TIMMDC1Q9NPL8 285 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 AASSQ9UDR5 926 aa17.02■□□□□ 0.31
PTPDC1-202ENST00000375360 H0YGG7 62 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 EIF1AYO14602 144 aaKnown RBP17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 CLPXO76031 633 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 PFN3P60673 137 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 ARF3P61204 181 aaPredicted RBP17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 EXOSC7Q15024 291 aaKnown RBP17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 OR1E3Q8WZA6 343 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 ACTRT3Q9BYD9 372 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 COMMD4Q9H0A8 199 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 TNFRSF12AQ9NP84 129 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 EP300Q09472 2414 aaPredicted RBP17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 FAAHO00519 579 aa17.01■□□□□ 0.31
PTPDC1-202ENST00000375360 SSNA1O43805 119 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms