RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 NSRP1Q9H0G5 558 aaKnown RBP13.96□□□□□ -0.17
HSPG2-201ENST00000374673 OR10A5Q9H207 317 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 TRIM33Q9UPN9 1127 aa13.96□□□□□ -0.17
HSPG2-201ENST00000374673 TNRC6AQ8NDV7 1962 aaKnown RBP13.96□□□□□ -0.18
HSPG2-201ENST00000374673 A0A087WV62 115 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 A0A1W2PRB8 838 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 RNASET2O00584 256 aaKnown RBP13.95□□□□□ -0.18
HSPG2-201ENST00000374673 PRKNO60260 465 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-201ENST00000374673 PLOD3O60568 738 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 SCN2BO60939 215 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 SLC22A3O75751 556 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 BCAS2O75934 225 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-201ENST00000374673 ZFAND5O76080 213 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 CBX7O95931 251 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 ALPPP05187 535 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 FAM87AP0C7U9 286 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 GPX3P22352 226 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 ZFP36L2P47974 494 aaKnown RBP13.95□□□□□ -0.18
HSPG2-201ENST00000374673 MANFP55145 182 aaKnown RBP13.95□□□□□ -0.18
HSPG2-201ENST00000374673 WNT3P56703 355 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 RNF4P78317 190 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 HSPB3Q12988 150 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 SQLEQ14534 574 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 PGS1Q32NB8 556 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 TRMT12Q53H54 448 aaKnown RBP13.95□□□□□ -0.18
HSPG2-201ENST00000374673 SPANXN4Q5MJ08 99 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 FHL5Q5TD97 284 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 OR4F3Q6IEY1 312 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 TCTN3Q6NUS6 607 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 PCSK4Q6UW60 755 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 IGFL2Q6UWQ7 119 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 ISLR2Q6UXK2 745 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 ZNF551Q7Z340 670 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-201ENST00000374673 C9orf40Q8IXQ3 194 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 OR7G2Q8NG99 324 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 NUBPLQ8TB37 319 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 OR5P2Q8WZ92 322 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 KAT2AQ92830 837 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 ABHD17AQ96GS6 310 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 ZNF354BQ96LW1 612 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 ZBTB18Q99592 522 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 NPAS2Q99743 824 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 ZNF385DQ9H6B1 395 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 TMEM45AQ9NWC5 275 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 PTGFRNQ9P2B2 879 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 TEKT2Q9UIF3 430 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 COPG1Q9Y678 874 aaKnown RBP13.95□□□□□ -0.18
HSPG2-201ENST00000374673 LOC400499M0QZD8 3231 aa13.95□□□□□ -0.18
HSPG2-201ENST00000374673 A8MUI8 341 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 PRAMEF2O60811 474 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 DRD4P21917 467 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 S100A3P33764 101 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 MC3RP41968 323 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 PHC1P78364 1004 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 DUSP8Q13202 625 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 MFAP5Q13361 173 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 EXOSC7Q15024 291 aaKnown RBP13.94□□□□□ -0.18
HSPG2-201ENST00000374673 EBPQ15125 230 aaKnown RBP13.94□□□□□ -0.18
HSPG2-201ENST00000374673 MEP1AQ16819 746 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 FAM174BQ3ZCQ3 159 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 ANXA8L1Q5VT79 327 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 B3GNTL1Q67FW5 361 aaPredicted RBP13.94□□□□□ -0.18
HSPG2-201ENST00000374673 PAOXQ6QHF9 649 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 TMEM107Q6UX40 140 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 SLC29A4Q7RTT9 530 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 RPS19BP1Q86WX3 136 aaKnown RBP13.94□□□□□ -0.18
HSPG2-201ENST00000374673 HPS6Q86YV9 775 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 OR2L13Q8N349 312 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 EXD3Q8N9H8 876 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 OR52R1Q8NGF1 315 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 OR5L2Q8NGL0 311 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 OR9I1Q8NGQ6 314 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 PSMA8Q8TAA3 256 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 ELP4Q96EB1 424 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 LMF1Q96S06 567 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 UBL7Q96S82 380 aaPredicted RBP13.94□□□□□ -0.18
HSPG2-201ENST00000374673 NEUROD4Q9HD90 331 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 SIRT3Q9NTG7 399 aaPredicted RBP13.94□□□□□ -0.18
HSPG2-201ENST00000374673 FAM120CQ9NX05 1096 aaKnown RBP13.94□□□□□ -0.18
HSPG2-201ENST00000374673 CFL2Q9Y281 166 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 ZNF451Q9Y4E5 1061 aa13.94□□□□□ -0.18
HSPG2-201ENST00000374673 PRSS51A0A1B0GVH4 220 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 FAM234BA2RU67 622 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 TMEM200CA6NKL6 621 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 C9JVG2 144 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 CDK2AP1O14519 115 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 COQ9O75208 318 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 PSMG1O95456 288 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 C6orf47O95873 294 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 IL6P05231 212 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 PGRP06401 933 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 SFTPCP11686 197 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 NCF2P19878 526 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-201ENST00000374673 EFNA1P20827 205 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-201ENST00000374673 GPC1P35052 558 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 EMDP50402 254 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 CDK9P50750 372 aaKnown RBP13.93□□□□□ -0.18
HSPG2-201ENST00000374673 MLF1P58340 268 aa13.93□□□□□ -0.18
HSPG2-201ENST00000374673 SF3A3Q12874 501 aaKnown RBP eCLIP13.93□□□□□ -0.18
HSPG2-201ENST00000374673 ACER2Q5QJU3 275 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms