RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SEMA3GQ9NS98 782 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 LEF1Q9UJU2 399 aaPredicted RBP14.04□□□□□ -0.16
LMO4-201ENST00000370542 UGT2A1Q9Y4X1 527 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 HIVEP1P15822 2718 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 APCP25054 2843 aa14.04□□□□□ -0.16
LMO4-201ENST00000370542 A0A1W2PP18 115 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 A0A1W2PQ72 361 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 KRT87PA6NCN2 255 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 CENPBD1B2RD01 187 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 J3QRK9 145 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 NR5A2O00482 541 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 NIPSNAP2O75323 286 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 CCDC159P0C7I6 412 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 SLC6A2P23975 617 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 CRHBPP24387 322 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 FMO4P31512 558 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 TPD52P55327 224 aaPredicted RBP14.03□□□□□ -0.16
LMO4-201ENST00000370542 KCNK10P57789 538 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 MVKQ03426 396 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.03□□□□□ -0.16
LMO4-201ENST00000370542 PRAMEF13Q5VWM6 474 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 PLEKHG7Q6ZR37 379 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 ARHGEF39Q8N4T4 335 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 TTC29Q8NA56 475 aaPredicted RBP14.03□□□□□ -0.16
LMO4-201ENST00000370542 OR9A1PQ8NGU1 263 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 MAGEE2Q8TD90 523 aaPredicted RBP14.03□□□□□ -0.16
LMO4-201ENST00000370542 TM9SF4Q92544 642 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 FBXL8Q96CD0 374 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 FBXL20Q96IG2 436 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 UGT2B28Q9BY64 529 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 POPDC3Q9HBV1 291 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 SDR39U1Q9NRG7 319 aaPredicted RBP14.03□□□□□ -0.16
LMO4-201ENST00000370542 ASF1BQ9NVP2 202 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 LUZP4Q9P127 313 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 GALPQ9UBC7 116 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 FBXL4Q9UKA2 621 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 BAG5Q9UL15 447 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 MED16Q9Y2X0 877 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 NAALAD2Q9Y3Q0 740 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 PCDHGA10Q9Y5H3 936 aa14.03□□□□□ -0.16
LMO4-201ENST00000370542 MDC1Q14676 2089 aaKnown RBP14.03□□□□□ -0.16
LMO4-201ENST00000370542 LOC105369274A0A096LPK9 316 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 IGKV1-8A0A0C4DH67 115 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 LOC102723532A0A0G2JNH3 316 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 HYKKA2RU49 373 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 ARHGEF33A8MVX0 844 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 FAM47E-STBD1D6RA91 191 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 LSM1O15116 133 aaKnown RBP14.02□□□□□ -0.17
LMO4-201ENST00000370542 EEDO75530 441 aaKnown RBP14.02□□□□□ -0.17
LMO4-201ENST00000370542 RSL1D1O76021 490 aaKnown RBP14.02□□□□□ -0.17
LMO4-201ENST00000370542 GABARAPO95166 117 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 OXSR1O95747 527 aaPredicted RBP14.02□□□□□ -0.17
LMO4-201ENST00000370542 GSNP06396 782 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 PKMP14618 531 aaKnown RBP14.02□□□□□ -0.17
LMO4-201ENST00000370542 SAT1P21673 171 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 HPCAL1P37235 193 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 OPRL1P41146 370 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 OR1D4P47884 311 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 GSK3BP49841 420 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 CLCN7P51798 805 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 VSX2P58304 361 aaPredicted RBP14.02□□□□□ -0.17
LMO4-201ENST00000370542 TAS2R39P59534 338 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 YBX1P67809 324 aaKnown RBP14.02□□□□□ -0.17
LMO4-201ENST00000370542 MRPL49Q13405 166 aaKnown RBP14.02□□□□□ -0.17
LMO4-201ENST00000370542 FAM98BQ52LJ0 330 aaKnown RBP14.02□□□□□ -0.17
LMO4-201ENST00000370542 ATG9BQ674R7 924 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 XAF1Q6GPH4 301 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 ZNF425Q6IV72 752 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 SLC2A7Q6PXP3 512 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 BLOC1S3Q6QNY0 202 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 FUNDC1Q8IVP5 155 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 SPARTQ8N0X7 666 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 OR4N4Q8N0Y3 316 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 ZCCHC7Q8N3Z6 543 aaKnown RBP14.02□□□□□ -0.17
LMO4-201ENST00000370542 ZADH2Q8N4Q0 377 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 OR11G2Q8NGC1 345 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 ZNF566Q969W8 418 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 TMEM125Q96AQ2 219 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 MVB12AQ96EY5 273 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 TXNDC15Q96J42 360 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 C10orf90Q96M02 699 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 ZFYVE21Q9BQ24 234 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 LHPPQ9H008 270 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 EHD1Q9H4M9 534 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 GSTO2Q9H4Y5 243 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 ALG2Q9H553 416 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 SYNPO2LQ9H987 977 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 CMTM6Q9NX76 183 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 MAP10Q9P2G4 905 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 CTSFQ9UBX1 484 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 WARS2Q9UGM6 360 aaKnown RBP14.02□□□□□ -0.17
LMO4-201ENST00000370542 FBXO5Q9UKT4 447 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 PDE10AQ9Y233 779 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 VPS9D1Q9Y2B5 631 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 CORINQ9Y5Q5 1042 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 HSPE1-MOB4S4R3N1 261 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 A3GALT2U3KPV4 340 aa14.02□□□□□ -0.17
LMO4-201ENST00000370542 ZNF99A8MXY4 864 aaPredicted RBP14.01□□□□□ -0.17
LMO4-201ENST00000370542 TMEM233B4DJY2 109 aa14.01□□□□□ -0.17
LMO4-201ENST00000370542 GFYI3L273 518 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms