RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 NFKBIDQ8NI38 313 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 POP5Q969H6 163 aaKnown RBP22.36■■□□□ 1.17
SNX3-203ENST00000368979 CTHRC1Q96CG8 243 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 EFHD1Q9BUP0 239 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 THUMPD1Q9NXG2 353 aaKnown RBP22.36■■□□□ 1.17
SNX3-203ENST00000368979 C6orf203Q9P0P8 240 aaPredicted RBP22.36■■□□□ 1.17
SNX3-203ENST00000368979 TRPC4Q9UBN4 977 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 AURKCQ9UQB9 309 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 MMACHCQ9Y4U1 282 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 PLOD3O60568 738 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 GCM2O75603 506 aaPredicted RBP22.36■■□□□ 1.17
SNX3-203ENST00000368979 GCKP35557 465 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 TXNL4AP83876 142 aaKnown RBP22.36■■□□□ 1.17
SNX3-203ENST00000368979 STX4Q12846 297 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 IL11RAQ14626 422 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 LASP1Q14847 261 aaKnown RBP22.36■■□□□ 1.17
SNX3-203ENST00000368979 TBCELQ5QJ74 424 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 COX15Q7KZN9 410 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 SLC30A8Q8IWU4 369 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 LILRA2Q8N149 483 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 FBXO30Q8TB52 745 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 PPWD1Q96BP3 646 aaKnown RBP22.36■■□□□ 1.17
SNX3-203ENST00000368979 MS4A4EQ96PG1 132 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 SLC7A5P2Q9GIP4 190 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 IRF2BPLQ9H1B7 796 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 RIMS3Q9UJD0 308 aa22.36■■□□□ 1.17
SNX3-203ENST00000368979 C19orf53Q9UNZ5 99 aaPredicted RBP22.36■■□□□ 1.17
SNX3-203ENST00000368979 OR10H2O60403 315 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 RFPL3O75679 317 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 BMP10O95393 424 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 MAOAP21397 527 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 PTDSS1P48651 473 aaKnown RBP22.35■■□□□ 1.17
SNX3-203ENST00000368979 ANXA11P50995 505 aaKnown RBP22.35■■□□□ 1.17
SNX3-203ENST00000368979 MYBPC3Q14896 1274 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 LRRC23Q53EV4 343 aaPredicted RBP22.35■■□□□ 1.17
SNX3-203ENST00000368979 TRMT12Q53H54 448 aaKnown RBP22.35■■□□□ 1.17
SNX3-203ENST00000368979 ENPP6Q6UWR7 440 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 DGAT2L6Q6ZPD8 337 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 QSOX2Q6ZRP7 698 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 CCDC80Q76M96 950 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 ZC3H7AQ8IWR0 971 aaKnown RBP22.35■■□□□ 1.17
SNX3-203ENST00000368979 LGI4Q8N135 537 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 FAM86B1Q8N7N1 296 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 SLC38A9Q8NBW4 561 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 OR5D16Q8NGK9 328 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 NRG4Q8WWG1 115 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 RAB8BQ92930 207 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 YIPF2Q9BWQ6 316 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 ALOXE3Q9BYJ1 711 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 NECTIN3Q9NQS3 549 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 SLC22A11Q9NSA0 550 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 V9GYQ6 96 aa22.35■■□□□ 1.17
SNX3-203ENST00000368979 FRYLO94915 3013 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 SCN2AQ99250 2005 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 OR2W5A6NFC9 320 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 HBQ1P09105 142 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 TFPTP0C1Z6 253 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 CT62P0C5K7 136 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 OR12D1P0DN82 309 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 MAN2A2P49641 1150 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 CRYBA2P53672 197 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 PCBP3P57721 371 aaKnown RBP22.34■■□□□ 1.17
SNX3-203ENST00000368979 E2F1Q01094 437 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 MC2RQ01718 297 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 MAPK11Q15759 364 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 INTS11Q5TA45 600 aaKnown RBP22.34■■□□□ 1.17
SNX3-203ENST00000368979 ZNF385CQ66K41 422 aaPredicted RBP22.34■■□□□ 1.17
SNX3-203ENST00000368979 LRRC74BQ6ZQY2 392 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 CBLL1Q75N03 491 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 SIMC1Q8NDZ2 872 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 C16orf58Q96GQ5 468 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 PKP2Q99959 881 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 UGT2B28Q9BY64 529 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 MKKSQ9NPJ1 570 aaPredicted RBP22.34■■□□□ 1.17
SNX3-203ENST00000368979 SAMD4AQ9UPU9 718 aaKnown RBP22.34■■□□□ 1.17
SNX3-203ENST00000368979 ANGPT4Q9Y264 503 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 CACNA1HO95180 2353 aa22.34■■□□□ 1.17
SNX3-203ENST00000368979 ASNA1O43681 348 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 PRKD3O94806 890 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 ONECUT2O95948 504 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 STT3AP46977 705 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 MAPK10P53779 464 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 MAP4K2Q12851 820 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 BIKQ13323 160 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 SERTAD2Q14140 314 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 NKG7Q16617 165 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.33■■□□□ 1.17
SNX3-203ENST00000368979 MFSD12Q6NUT3 480 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 GALNT10Q86SR1 603 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 SLC38A5Q8WUX1 472 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 SEPHS2Q99611 448 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 YIPF4Q9BSR8 244 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 ACTRT3Q9BYD9 372 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 CXorf21Q9HAI6 301 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 FBXO8Q9NRD0 319 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 P2RX2Q9UBL9 471 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 ZNF639Q9UID6 485 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 RPS6KA6Q9UK32 745 aa22.33■■□□□ 1.17
SNX3-203ENST00000368979 ASCC3Q8N3C0 2202 aaKnown RBP22.33■■□□□ 1.16
SNX3-203ENST00000368979 IGKV3D-11A0A0A0MRZ8 115 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms