RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 MDGA2Q7Z553 956 aa20.76■□□□□ 0.91
ECHDC1-203ENST00000368291 TICAM1Q8IUC6 712 aa20.76■□□□□ 0.91
ECHDC1-203ENST00000368291 VWA5B2Q8N398 1253 aa20.76■□□□□ 0.91
ECHDC1-203ENST00000368291 ZNF441Q8N8Z8 693 aa20.76■□□□□ 0.91
ECHDC1-203ENST00000368291 CCT7Q99832 543 aa20.76■□□□□ 0.91
ECHDC1-203ENST00000368291 BRINP2Q9C0B6 783 aa20.76■□□□□ 0.91
ECHDC1-203ENST00000368291 OR10A5Q9H207 317 aa20.76■□□□□ 0.91
ECHDC1-203ENST00000368291 AGPAT4Q9NRZ5 378 aa20.76■□□□□ 0.91
ECHDC1-203ENST00000368291 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.76■□□□□ 0.91
ECHDC1-203ENST00000368291 ARGLU1Q9NWB6 273 aaPredicted RBP20.76■□□□□ 0.91
ECHDC1-203ENST00000368291 TMED5Q9Y3A6 229 aa20.76■□□□□ 0.91
ECHDC1-203ENST00000368291 PEX11AO75192 247 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 VPS4BO75351 444 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 CBX6O95503 412 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 GNLYP22749 145 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 MAPKAPK3Q16644 382 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 TRMT12Q53H54 448 aaKnown RBP20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 ZNF628Q5EBL2 1059 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 IL20RBQ6UXL0 311 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 SLC29A4Q7RTT9 530 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 ATCAYQ86WG3 371 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 TMEM178AQ8NBL3 297 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 ZNF675Q8TD23 568 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 ASB15Q8WXK1 588 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 PPP3R2Q96LZ3 170 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 C5orf34Q96MH7 638 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 GAL3ST4Q96RP7 486 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 SH3GL2Q99962 352 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 BAIAP2L1Q9UHR4 511 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 VPS4AQ9UN37 437 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 DTX4Q9Y2E6 619 aa20.75■□□□□ 0.91
ECHDC1-203ENST00000368291 ASPDHA6ND91 283 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 A8MVJ9 347 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 MYO1GB0I1T2 1018 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 WISP2O76076 250 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 CBX7O95931 251 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 PCSK2P16519 638 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 MRPS35P82673 323 aaKnown RBP20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 KCNC4Q03721 635 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 MRPL49Q13405 166 aaKnown RBP20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 EXOSC7Q15024 291 aaKnown RBP20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 C6orf136Q5SQH8 315 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 GPALPP1Q8IXQ4 340 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 SAMD14Q8IZD0 417 aaPredicted RBP20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 BCORP1Q8N888 145 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 OR7G1Q8NGA0 311 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 OR9A2Q8NGT5 310 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 C16orf52Q8NHV5 167 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 GFM2Q969S9 779 aaKnown RBP20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 ADIPOR1Q96A54 375 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 ATP6V1G3Q96LB4 118 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 TSSK3Q96PN8 268 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 SLX1AQ9BQ83 275 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 VIPAS39Q9H9C1 493 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 MIEF1Q9NQG6 463 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 HPF1Q9NWY4 346 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 ENTPD4Q9Y227 616 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 NINQ8N4C6 2090 aa20.74■□□□□ 0.91
ECHDC1-203ENST00000368291 SNUPNO95149 360 aaKnown RBP20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 BCKDHAP12694 445 aa20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 RPL14P50914 215 aaKnown RBP20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 TDGF1P3P51864 188 aa20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 C6orf163Q5TEZ5 329 aa20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 CLHC1Q8NHS4 586 aa20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 TMEM125Q96AQ2 219 aa20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 FRMD6Q96NE9 622 aa20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 ANKRA2Q9H9E1 313 aa20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 PFDN4Q9NQP4 134 aa20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 NKIRAS1Q9NYS0 192 aa20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 HIVEP3Q5T1R4 2406 aa20.73■□□□□ 0.91
ECHDC1-203ENST00000368291 C2orf92A0A1B0GVN3 265 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 SNNO75324 88 aaPredicted RBP20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 SASH3O75995 380 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 MST1P26927 711 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 PDE7AQ13946 482 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 PDCD2Q16342 344 aaPredicted RBP20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 ZNF791Q3KP31 576 aaPredicted RBP20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 ATP6AP1LQ52LC2 224 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 ZNF385BQ569K4 471 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 OPN5Q6U736 354 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 SLC15A4Q8N697 577 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 DNAJB8Q8NHS0 232 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 NR4A3Q92570 626 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 KAT2AQ92830 837 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 TP53INP1Q96A56 240 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 ZNF764Q96H86 408 aaPredicted RBP20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 DEPPQ9NTK1 212 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 GIMAP4Q9NUV9 329 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 OLAHQ9NV23 265 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 PNPOQ9NVS9 261 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 ERVK-11Q9UQG0 969 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 NUP214P35658 2090 aaPredicted RBP20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 MYO18BQ8IUG5 2567 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 POLEQ07864 2286 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 TBX19O60806 448 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 LRATO95237 230 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 GPX3P22352 226 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 MPIP34949 423 aa20.72■□□□□ 0.91
ECHDC1-203ENST00000368291 EMDP50402 254 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms