RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ZFP90Q8TF47 636 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 TMEM125Q96AQ2 219 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 CDRT15Q96T59 188 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 SPRY4Q9C004 299 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 TRIM4Q9C037 500 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 VN1R1Q9GZP7 353 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 WDR54Q9H977 334 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 AKIRIN1Q9H9L7 192 aaPredicted RBP19.31■□□□□ 0.68
SHISA4-201ENST00000362011 ADA2Q9NZK5 511 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 ABCD2Q9UBJ2 740 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 NXT1Q9UKK6 140 aaKnown RBP19.31■□□□□ 0.68
SHISA4-201ENST00000362011 CLDN16Q9Y5I7 305 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 CFAP46Q8IYW2 2715 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 IGKV3D-11A0A0A0MRZ8 115 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 RNF103-CHMP3A0A140T963 221 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 EVPLLA8MZ36 301 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 FLNBO75369 2602 aaKnown RBP19.3■□□□□ 0.68
SHISA4-201ENST00000362011 HEXBP07686 556 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 PTGER1P34995 402 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 CHI3L1P36222 383 aaPredicted RBP19.3■□□□□ 0.68
SHISA4-201ENST00000362011 STT3AP46977 705 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 MTPNP58546 118 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 FAM199XQ6PEV8 388 aaPredicted RBP19.3■□□□□ 0.68
SHISA4-201ENST00000362011 TMEM107Q6UX40 140 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 LAPTM4BQ86VI4 370 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 SLC15A3Q8IY34 581 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 ZNF843Q8N446 348 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 ADCY4Q8NFM4 1077 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 OR5AK3PQ8NH89 298 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 ZNF675Q8TD23 568 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 TSLPQ969D9 159 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 MOAP1Q96BY2 351 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 AURKBQ96GD4 344 aaPredicted RBP19.3■□□□□ 0.68
SHISA4-201ENST00000362011 MMADHCQ9H3L0 296 aaPredicted RBP19.3■□□□□ 0.68
SHISA4-201ENST00000362011 SOX17Q9H6I2 414 aaPredicted RBP19.3■□□□□ 0.68
SHISA4-201ENST00000362011 TPT1P8Q9HAU6 139 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 C3orf14Q9HBI5 128 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 TMEM181Q9P2C4 612 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 PADI1Q9ULC6 663 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 CORO2BQ9UQ03 480 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 AP3M1Q9Y2T2 418 aa19.3■□□□□ 0.68
SHISA4-201ENST00000362011 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.3■□□□□ 0.68
SHISA4-201ENST00000362011 PLOD2O00469 737 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 NME4O00746 187 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 EMC8O43402 210 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 KRT75O95678 551 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 RECKO95980 971 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 IFNA16P05015 189 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 CYC1P08574 325 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 CD63P08962 238 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 IFI6P09912 130 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 PLA2G2AP14555 144 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 RBMS1P29558 406 aaKnown RBP19.29■□□□□ 0.68
SHISA4-201ENST00000362011 GALNSP34059 522 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 CCT3P49368 545 aaKnown RBP19.29■□□□□ 0.68
SHISA4-201ENST00000362011 SELPLGQ14242 412 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 PRICKLE4Q2TBC4 344 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 ZNF628Q5EBL2 1059 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 RABL3Q5HYI8 236 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 TIPARPQ7Z3E1 657 aaKnown RBP19.29■□□□□ 0.68
SHISA4-201ENST00000362011 CLEC4FQ8N1N0 589 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 ESX1Q8N693 406 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 KAT2AQ92830 837 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 ELP4Q96EB1 424 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 RBM18Q96H35 190 aaKnown RBP19.29■□□□□ 0.68
SHISA4-201ENST00000362011 RAB3IPQ96QF0 476 aaPredicted RBP19.29■□□□□ 0.68
SHISA4-201ENST00000362011 SPSB2Q99619 263 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 THUMPD3Q9BV44 507 aaKnown RBP19.29■□□□□ 0.68
SHISA4-201ENST00000362011 TRIM8Q9BZR9 551 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 RAD21L1Q9H4I0 556 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 CMTM6Q9NX76 183 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 ACSL6Q9UKU0 697 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 GMEB1Q9Y692 573 aa19.29■□□□□ 0.68
SHISA4-201ENST00000362011 TCRBV16S1A1N1A0A5B0 115 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 CFAP73A6NFT4 308 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 ANKRD65E5RJM6 399 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 CNOT3O75175 753 aaKnown RBP19.28■□□□□ 0.68
SHISA4-201ENST00000362011 NQO1P15559 274 aaKnown RBP19.28■□□□□ 0.68
SHISA4-201ENST00000362011 SLC5A2P31639 672 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 MC3RP41968 323 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 EFNA3P52797 238 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 EEFSECP57772 596 aaKnown RBP19.28■□□□□ 0.68
SHISA4-201ENST00000362011 PRR5P85299 388 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 NCF4Q15080 339 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 SAMD4BQ5PRF9 694 aaKnown RBP19.28■□□□□ 0.68
SHISA4-201ENST00000362011 SAXO2Q658L1 398 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 SHISA6Q6ZSJ9 500 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 SZRD1Q7Z422 152 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 SPACA3Q8IXA5 215 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 PPWD1Q96BP3 646 aaKnown RBP19.28■□□□□ 0.68
SHISA4-201ENST00000362011 FAM120BQ96EK7 910 aaKnown RBP19.28■□□□□ 0.68
SHISA4-201ENST00000362011 MAGED4Q96JG8 741 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 SLC46A1Q96NT5 459 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 EPS8L2Q9H6S3 715 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 ZCCHC3Q9NUD5 404 aaKnown RBP19.28■□□□□ 0.68
SHISA4-201ENST00000362011 MAT2BQ9NZL9 334 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 PTGFRNQ9P2B2 879 aa19.28■□□□□ 0.68
SHISA4-201ENST00000362011 A0A087WV62 115 aa19.27■□□□□ 0.68
SHISA4-201ENST00000362011 IDSB3KWA1 339 aa19.27■□□□□ 0.68
SHISA4-201ENST00000362011 DXOO77932 396 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms