RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TCF7L1Q9HCS4 588 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 AKIP1Q9NQ31 210 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 MGAT4AQ9UM21 535 aa13.23□□□□□ -0.29
COL6A1-201ENST00000361866 GTPBP1O00178 669 aaKnown RBP13.22□□□□□ -0.29
COL6A1-201ENST00000361866 SOX2P48431 317 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 WNT4P56705 351 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 KCNC3Q14003 757 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 MBTPS1Q14703 1052 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 DNAJC5GQ8N7S2 189 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 GDPD1Q8N9F7 314 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 OR5H6Q8NGV6 325 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 IGSF21Q96ID5 467 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 MS4A4AQ96JQ5 239 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 ZNF514Q96K75 400 aaPredicted RBP13.22□□□□□ -0.29
COL6A1-201ENST00000361866 RDH14Q9HBH5 336 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 LHX3Q9UBR4 397 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 PHF11Q9UIL8 331 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 EXOSC1Q9Y3B2 195 aaKnown RBP13.22□□□□□ -0.29
COL6A1-201ENST00000361866 MCM3APO60318 1980 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 LOXHD1Q8IVV2 1947 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 ADH1CP00326 375 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 IGLV3-25P01717 112 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 RPS19P39019 145 aaKnown RBP13.22□□□□□ -0.29
COL6A1-201ENST00000361866 NAA10P41227 235 aaPredicted RBP13.22□□□□□ -0.29
COL6A1-201ENST00000361866 CCSMST1Q4G0I0 132 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 TMEM107Q6UX40 140 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 IL20RBQ6UXL0 311 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 WDR53Q7Z5U6 358 aaPredicted RBP13.22□□□□□ -0.29
COL6A1-201ENST00000361866 OAFQ86UD1 273 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 DOCK5Q9H7D0 1870 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 A0A1B0GVT2 93 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 ANKRD34BA5PLL1 514 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 M0R233 179 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 MEN1O00255 615 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 IGFBP1P08833 259 aaPredicted RBP13.22□□□□□ -0.29
COL6A1-201ENST00000361866 ANXA3P12429 323 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 LAG3P18627 525 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 PPM1AP35813 382 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 SLC19A1P41440 591 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 OR12D2P58182 307 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 SLC14A1Q13336 389 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 SNTB2Q13425 540 aaKnown RBP13.22□□□□□ -0.29
COL6A1-201ENST00000361866 WDR45BQ5MNZ6 344 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 IRAK1BP1Q5VVH5 260 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 GRHL2Q6ISB3 625 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 PLBD1Q6P4A8 553 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 XKRXQ6PP77 449 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 FAM180AQ6UWF9 173 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 POMGNT2Q8NAT1 580 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 ANKK1Q8NFD2 765 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 TDP1Q9NUW8 608 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 ZFC3H1O60293 1989 aaKnown RBP13.22□□□□□ -0.29
COL6A1-201ENST00000361866 KIAA1217Q5T5P2 1943 aa13.22□□□□□ -0.29
COL6A1-201ENST00000361866 SOBPA7XYQ1 873 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 NUPL2O15504 423 aaKnown RBP13.21□□□□□ -0.29
COL6A1-201ENST00000361866 CRYZL1O95825 349 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 TSPAN12O95859 305 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 SLC35G6P0C7Q6 338 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 EDNRAP25101 427 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 TGFBR2P37173 567 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 FNTBP49356 437 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 ACVR1Q04771 509 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 CAMK1Q14012 370 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 PRSS36Q5K4E3 855 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 MSANTD1Q6ZTZ1 278 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 HSD11B1LQ7Z5J1 315 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 PDZD3Q86UT5 571 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 GALNT13Q8IUC8 556 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 OR4N5Q8IXE1 308 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 CYB561A3Q8NBI2 242 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 TXNDC15Q96J42 360 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 KLHL31Q9H511 634 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 ACTL8Q9H568 366 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 NDRG4Q9ULP0 352 aaKnown RBP13.21□□□□□ -0.29
COL6A1-201ENST00000361866 HMX3A6NHT5 357 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 PEX11BO96011 259 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 PRKACBP22694 351 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 LRIT3Q3SXY7 679 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 NXPE4Q6UWF7 544 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 OR8K5Q8NH50 307 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 TSEN15Q8WW01 171 aaKnown RBP13.21□□□□□ -0.29
COL6A1-201ENST00000361866 CCDC120Q96HB5 630 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 IGLV3-10A0A075B6K4 115 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 URADA6NGE7 173 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 ANXA2P2A6NMY6 339 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 ANXA2P07355 339 aaKnown RBP13.21□□□□□ -0.29
COL6A1-201ENST00000361866 SSTR2P30874 369 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 FAUP35544 74 aaKnown RBP13.21□□□□□ -0.29
COL6A1-201ENST00000361866 GAB1Q13480 694 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 TEAD2Q15562 447 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 SYPL1Q16563 259 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 C4orf46Q504U0 113 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 TMEM173Q86WV6 379 aaPredicted RBP13.21□□□□□ -0.29
COL6A1-201ENST00000361866 NRMQ8IXM6 262 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 OR4F15Q8NGB8 312 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 COQ8AQ8NI60 647 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 WFDC5Q8TCV5 224 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 GNG8Q9UK08 70 aa13.21□□□□□ -0.29
COL6A1-201ENST00000361866 LOC100509620A0A075B734 347 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 SLC16A5O15375 505 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms