RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 SF3B4Q15427 424 aaKnown RBP eCLIP11.74□□□□□ -0.53
UBA3-202ENST00000361055 OCLNQ16625 522 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 TMEM52BQ4KMG9 183 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 DCST1Q5T197 706 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 CEACAM20Q6UY09 585 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 SLC9B2Q86UD5 537 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 NANOGP1Q8N7R0 232 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 PROKR2Q8NFJ6 384 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 SLC38A5Q8WUX1 472 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 FAM131CQ96AQ9 280 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 WDFY2Q96P53 400 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 IL4I1Q96RQ9 567 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 SLC6A17Q9H1V8 727 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 NEK6Q9HC98 313 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 SMURF1Q9HCE7 757 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 MIEF1Q9NQG6 463 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 ITM2BQ9Y287 266 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 VCANP13611 3396 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 C17orf113A0A1B0GUU1 675 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 RGS13O14921 159 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 CAPN5O15484 640 aaPredicted RBP11.74□□□□□ -0.53
UBA3-202ENST00000361055 LILRB5O75023 590 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 PDE9AO76083 593 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 NDUFV2P19404 249 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 COPZ1P61923 177 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 TSTA3Q13630 321 aaPredicted RBP11.74□□□□□ -0.53
UBA3-202ENST00000361055 GAS6Q14393 721 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 TCTN3Q6NUS6 607 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 TMIGD1Q6UXZ0 262 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 USP30Q70CQ3 517 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 CLIP4Q8N3C7 705 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 CELF2-AS1Q8N7Q2 184 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 OR8J1Q8NGP2 316 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 OR2A14Q96R47 310 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 MND1Q9BWT6 205 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 TMEM121BQ9BXQ6 578 aaPredicted RBP11.74□□□□□ -0.53
UBA3-202ENST00000361055 ERVK13-1Q9NX77 482 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 SERGEFQ9UGK8 458 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 RBMX2Q9Y388 322 aaKnown RBP11.74□□□□□ -0.53
UBA3-202ENST00000361055 PLXNA2O75051 1894 aa11.74□□□□□ -0.53
UBA3-202ENST00000361055 ZNF670-ZNF695F2Z2N8 137 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 MMP20O60882 483 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 GABRG2P18507 467 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 DDCP20711 480 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 HTR3AP46098 478 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 ALDH6A1Q02252 535 aaKnown RBP11.73□□□□□ -0.53
UBA3-202ENST00000361055 DOC2BQ14184 412 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 TJAP1Q5JTD0 557 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 SLC25A30Q5SVS4 291 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 CASP12Q6UXS9 341 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 SLC7A5P1Q8MH63 180 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 SLC34A3Q8N130 599 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 OR8H2Q8N162 312 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 KRT78Q8N1N4 520 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 HORMAD2Q8N7B1 307 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 GPR32P1Q8NGA4 272 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 GANCQ8TET4 914 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 RASSF5Q8WWW0 418 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 CLDN23Q96B33 292 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 LINC00615Q96LM1 132 aaPredicted RBP11.73□□□□□ -0.53
UBA3-202ENST00000361055 COQ10AQ96MF6 247 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 BARHL1Q9BZE3 327 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 ZCCHC2Q9C0B9 1178 aaKnown RBP11.73□□□□□ -0.53
UBA3-202ENST00000361055 SPNS1Q9H2V7 528 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 EXOSC4Q9NPD3 245 aaKnown RBP11.73□□□□□ -0.53
UBA3-202ENST00000361055 CCDC177Q9NQR7 707 aaPredicted RBP11.73□□□□□ -0.53
UBA3-202ENST00000361055 TBC1D24Q9ULP9 559 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 STUB1Q9UNE7 303 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 NCKAP1Q9Y2A7 1128 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 TRPM6Q9BX84 2022 aa11.73□□□□□ -0.53
UBA3-202ENST00000361055 CSO75390 466 aaKnown RBP11.72□□□□□ -0.53
UBA3-202ENST00000361055 H1F0P07305 194 aaKnown RBP11.72□□□□□ -0.53
UBA3-202ENST00000361055 ELAVL4P26378 380 aaKnown RBP11.72□□□□□ -0.53
UBA3-202ENST00000361055 KCNJ5P48544 419 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 XKP51811 444 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 TAS2R38P59533 333 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 MEF2AQ02078 507 aaPredicted RBP11.72□□□□□ -0.53
UBA3-202ENST00000361055 SIGLEC14Q08ET2 396 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 COX10Q12887 443 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 TP53BP2Q13625 1128 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 SEC23BQ15437 767 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 MFSD4BQ5TF39 518 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 RSBN1Q5VWQ0 802 aaPredicted RBP11.72□□□□□ -0.53
UBA3-202ENST00000361055 LCTLQ6UWM7 567 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 KIAA1324Q6UXG2 1013 aaKnown RBP11.72□□□□□ -0.53
UBA3-202ENST00000361055 TMPRSS11AQ6ZMR5 421 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 SPATC1Q76KD6 591 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 VN1R5Q7Z5H4 357 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 FAM129CQ86XR2 697 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 FAM26EQ8N5C1 309 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 ZNF740Q8NDX6 193 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 OR6F1Q8NGZ6 308 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 CXorf40AQ8TE69 158 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 DTD2Q96FN9 168 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 ZNF514Q96K75 400 aaPredicted RBP11.72□□□□□ -0.53
UBA3-202ENST00000361055 NECAB3Q96P71 396 aaPredicted RBP11.72□□□□□ -0.53
UBA3-202ENST00000361055 FUZQ9BT04 418 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 POLR2J3Q9H1A7 115 aaKnown RBP11.72□□□□□ -0.53
UBA3-202ENST00000361055 CHRDQ9H2X0 955 aa11.72□□□□□ -0.53
UBA3-202ENST00000361055 DPEP2Q9H4A9 486 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms