RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 FABP1P07148 127 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 ERCC1P07992 297 aaPredicted RBP6.28□□□□□ -1.4
TRIM38-201ENST00000357085 BCKDHAP12694 445 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 S100GP29377 79 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 TLX1P31314 330 aaPredicted RBP6.28□□□□□ -1.4
TRIM38-201ENST00000357085 NRG3P56975 720 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 WDR5P61964 334 aaKnown RBP6.28□□□□□ -1.4
TRIM38-201ENST00000357085 CDK6Q00534 326 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 SMN1Q16637 294 aaKnown RBP6.28□□□□□ -1.4
TRIM38-201ENST00000357085 PTCHD3Q3KNS1 767 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 SAXO2Q658L1 398 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 MED27Q6P2C8 311 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 GSG1LQ6UXU4 331 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 CEP68Q76N32 757 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 TAS1R3Q7RTX0 852 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 PRICKLE2Q7Z3G6 844 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 RNF113BQ8IZP6 322 aaKnown RBP6.28□□□□□ -1.4
TRIM38-201ENST00000357085 ARFGAP1Q8N6T3 406 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 ING5Q8WYH8 240 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 RPL10LQ96L21 214 aaKnown RBP6.28□□□□□ -1.4
TRIM38-201ENST00000357085 SMAD5Q99717 465 aaKnown RBP6.28□□□□□ -1.4
TRIM38-201ENST00000357085 C11orf84Q9BUA3 381 aaPredicted RBP6.28□□□□□ -1.4
TRIM38-201ENST00000357085 REEP4Q9H6H4 257 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 CARS2Q9HA77 564 aaKnown RBP6.28□□□□□ -1.4
TRIM38-201ENST00000357085 TAS2R10Q9NYW0 307 aa6.28□□□□□ -1.4
TRIM38-201ENST00000357085 IGKV6D-21A0A0A0MT36 114 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 WTIPA6NIX2 430 aaPredicted RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 AIPO00170 330 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 MMP10P09238 476 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 TPT1P13693 172 aaKnown RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 AQP1P29972 269 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 SLC16A1P53985 500 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ACVR1Q04771 509 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 EFEMP1Q12805 493 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ALG1LQ6GMV1 187 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 TMEM81Q6P7N7 255 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 IL34Q6ZMJ4 242 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 HIST2H3AQ71DI3 136 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 SLC51AQ86UW1 340 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 SFXN5Q8TD22 340 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 RGMAQ96B86 450 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 CCM2Q9BSQ5 444 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ZNF98A6NK75 572 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 H3BRB1 525 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 PRAMEF11O60813 436 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 GSRP00390 522 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 VIPP01282 170 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ETFAP13804 333 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 RNASE12Q5GAN4 147 aaKnown RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 PAGE3Q5JUK9 113 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ZNF648Q5T619 568 aaPredicted RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 LINC00518Q8N0U6 118 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ZNF366Q8N895 744 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 OR5M3Q8NGP4 307 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ELP5Q8TE02 316 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 NKX6-2Q9C056 277 aaPredicted RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 GALNT9Q9HCQ5 603 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 A0A0G2JMP0 313 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 RNF13O43567 381 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 CDC40O60508 579 aaKnown RBP eCLIP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 AK1P00568 194 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 FHP07954 510 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 MPC1LP0DKB6 136 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 TYRP1P17643 537 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 KCNC1P48547 511 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ILKQ13418 452 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ENPP7Q6UWV6 458 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 WDTC1Q8N5D0 677 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 C12orf29Q8N999 325 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 NETO2Q8NC67 525 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 OR4M2Q8NGB6 313 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 OR4K2Q8NGD2 314 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 TMPRSS13Q9BYE2 586 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 HSPB2A8KAH6 182 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 NR2F1P10589 423 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 POU2F1P14859 743 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ALAS2P22557 587 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ADRA1AP35348 466 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 MTNR1AP48039 350 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 HSPB2Q16082 182 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ARHGAP11AQ6P4F7 1023 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 RBM23Q86U06 439 aaKnown RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 MRGPRX2Q96LB1 330 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 GPR20Q99678 358 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 TMEM39BQ9GZU3 492 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 LDAHQ9H6V9 325 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 MGAT4CQ9UBM8 478 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 LCMT2O60294 686 aaKnown RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 OR2F2O95006 317 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 NR2C1P13056 603 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 ZNF30P17039 623 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 PSMA6P60900 246 aaKnown RBP6.27□□□□□ -1.41
TRIM38-201ENST00000357085 OR2F1Q13607 317 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 MBTPS1Q14703 1052 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 PKDCCQ504Y2 493 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 CRB2Q5IJ48 1285 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 MARCH9Q86YJ5 346 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 DBF4BQ8NFT6 615 aa6.27□□□□□ -1.41
TRIM38-201ENST00000357085 HLA-DQB1P01920 261 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms