RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 ART5Q96L15 291 aa12.31□□□□□ -0.44
RAP1A-201ENST00000356415 SH3GL1Q99961 368 aa12.31□□□□□ -0.44
RAP1A-201ENST00000356415 SLC39A3Q9BRY0 314 aa12.31□□□□□ -0.44
RAP1A-201ENST00000356415 THUMPD3Q9BV44 507 aaKnown RBP12.31□□□□□ -0.44
RAP1A-201ENST00000356415 OR8D2Q9GZM6 311 aa12.31□□□□□ -0.44
RAP1A-201ENST00000356415 TPT1P8Q9HAU6 139 aa12.31□□□□□ -0.44
RAP1A-201ENST00000356415 SLC6A13Q9NSD5 602 aa12.31□□□□□ -0.44
RAP1A-201ENST00000356415 SIRT3Q9NTG7 399 aaPredicted RBP12.31□□□□□ -0.44
RAP1A-201ENST00000356415 IL17BQ9UHF5 180 aa12.31□□□□□ -0.44
RAP1A-201ENST00000356415 A0A087WV62 115 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 RNF103-CHMP3A0A140T963 221 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 EVPLLA8MZ36 301 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 CLIC1O00299 241 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 UPK1AO00322 258 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 GYG2O15488 501 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 PLOD3O60568 738 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 CREG1O75629 220 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 BCAS2O75934 225 aaPredicted RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 KRT75O95678 551 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 EEF1A2Q05639 463 aaKnown RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 MGAT2Q10469 447 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 TP53BP2Q13625 1128 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 SPRED3Q2MJR0 410 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 RUNDC3AQ59EK9 446 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 NANOGP8Q6NSW7 305 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 PAPD4Q6PIY7 484 aaKnown RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 C6orf120Q7Z4R8 191 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 MORN4Q8NDC4 146 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 NUP43Q8NFH3 380 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 OR56A1Q8NGH5 318 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 FBXO27Q8NI29 283 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 AURKBQ96GD4 344 aaPredicted RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 SENP5Q96HI0 755 aaPredicted RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 NAF1Q96HR8 494 aaKnown RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 ANKRD27Q96NW4 1050 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 C1orf21Q9H246 121 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 ANKRA2Q9H9E1 313 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 NANOGQ9H9S0 305 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 TAS2R1Q9NYW7 299 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 SLC25A37Q9NYZ2 338 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 BCAP29Q9UHQ4 241 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 C19orf53Q9UNZ5 99 aaPredicted RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 ERVK-19Q9WJR5 959 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 L3MBTL1Q9Y468 752 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 HS3ST3B1Q9Y662 390 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 MRPS18BQ9Y676 258 aaKnown RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 LOC102723996A0A087X1L8 192 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 C15orf38-AP3S2A0A0A6YYH1 394 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 ERICH4A6NGS2 130 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 SEC24DO94855 1032 aaPredicted RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 IFI6P09912 130 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 LIFP15018 202 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 PPIBP23284 216 aaKnown RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 SSTR4P31391 388 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 PSME3P61289 254 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 FUT7Q11130 342 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 GAB1Q13480 694 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 EXOSC7Q15024 291 aaKnown RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 LACTB2Q53H82 288 aaPredicted RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 ARPINQ7Z6K5 226 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 YTHDF3Q7Z739 585 aaKnown RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 VASH2Q86V25 355 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 RAB43Q86YS6 212 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 DEFB107AQ8IZN7 70 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 PGAM4Q8N0Y7 254 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 OR2L13Q8N349 312 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 ZNF248Q8NDW4 579 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 OR7G1Q8NGA0 311 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 PNPT1Q8TCS8 783 aaKnown RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 SLC2A12Q8TD20 617 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 SFXN5Q8TD22 340 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 ZFP90Q8TF47 636 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 KCNE4Q8WWG9 221 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 SLC7A6OSQ96CW6 309 aaPredicted RBP12.3□□□□□ -0.44
RAP1A-201ENST00000356415 FBXL20Q96IG2 436 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 MESP1Q9BRJ9 268 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 BTBD10Q9BSF8 475 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 TRIM4Q9C037 500 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 COPS7AQ9UBW8 275 aa12.3□□□□□ -0.44
RAP1A-201ENST00000356415 CFAP54Q96N23 3096 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 TRBV5-3A0A0A0MS03 114 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 SAGE2PA6NJ88 616 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 FXYD1O00168 92 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 HRKO00198 91 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 PEX12O00623 359 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 COQ9O75208 318 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 S1PR1P21453 382 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 SLC6A2P23975 617 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 CPOXP36551 454 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 CLN3Q13286 438 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 DNAL1Q4LDG9 190 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 KIRREL2Q6UWL6 708 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 NDUFAF7Q7L592 441 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 PPP1R32Q7Z5V6 425 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 MSRB3Q8IXL7 192 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 B3GNT7Q8NFL0 401 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 OR11G2Q8NGC1 345 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 OR52R1Q8NGF1 315 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 OR8J3Q8NGG0 315 aa12.29□□□□□ -0.44
RAP1A-201ENST00000356415 ECSITQ9BQ95 431 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms