RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 NDUFAF1Q9Y375 327 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 MAP4K5Q9Y4K4 846 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 LY6G6EA0A0G2JKS1 128 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 A0A1W2PQ09 198 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 EIF3FO00303 357 aaPredicted RBP5.26□□□□□ -1.57
CD47-201ENST00000355354 GNB5O14775 395 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 ADAMDEC1O15204 470 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 CHRM4P08173 479 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 GKN3PP0CG01 181 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 GIMD1P0DJR0 217 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 ZNF24P17028 368 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 TNFSF8P32971 234 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 CLDN6P56747 220 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 NFKB2Q00653 900 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 TSTA3Q13630 321 aaPredicted RBP5.26□□□□□ -1.57
CD47-201ENST00000355354 MAD2L1BPQ15013 274 aaPredicted RBP5.26□□□□□ -1.57
CD47-201ENST00000355354 ZBED5Q49AG3 693 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 SLC30A6Q6NXT4 461 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 TMEM92Q6UXU6 159 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 PATL1Q86TB9 770 aaKnown RBP5.26□□□□□ -1.57
CD47-201ENST00000355354 MAP7D3Q8IWC1 876 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 TRIML2Q8N7C3 387 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 BRSK1Q8TDC3 778 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 SLC25A38Q96DW6 304 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 TMEM169Q96HH4 297 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 LRGUKQ96M69 825 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 OR52E6Q96RD3 313 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 TBX5Q99593 518 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 SPSB2Q99619 263 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 GAL3ST1Q99999 423 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 CLK4Q9HAZ1 481 aaKnown RBP5.26□□□□□ -1.57
CD47-201ENST00000355354 MEPEQ9NQ76 525 aaPredicted RBP5.26□□□□□ -1.57
CD47-201ENST00000355354 U3KQA8 63 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 LOC105369274A0A096LPK9 316 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 ANKRD34BA5PLL1 514 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 MPTX1A8MV57 137 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 H7BY64 318 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 GABARAPO95166 117 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 PCDH8O95206 1070 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 EDNRAP25101 427 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 MAT2AP31153 395 aaKnown RBP5.26□□□□□ -1.57
CD47-201ENST00000355354 NAE1Q13564 534 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 EFR3AQ14156 821 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 PTGES3Q15185 160 aaKnown RBP5.26□□□□□ -1.57
CD47-201ENST00000355354 ZNF805Q5CZA5 627 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 TSSK4Q6SA08 328 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 ERI1Q8IV48 349 aaKnown RBP5.26□□□□□ -1.57
CD47-201ENST00000355354 OR4N4Q8N0Y3 316 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 ZNF321PQ8N8H1 164 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 ZSCAN1Q8NBB4 408 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 MCOLN3Q8TDD5 553 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 SMG7Q92540 1137 aaKnown RBP5.26□□□□□ -1.57
CD47-201ENST00000355354 SMARCD1Q96GM5 515 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 PRAP1Q96NZ9 151 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 OR1F2PQ96R84 312 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 CHST6Q9GZX3 395 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 CLMPQ9H6B4 373 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 MYEF2Q9P2K5 600 aaKnown RBP5.26□□□□□ -1.57
CD47-201ENST00000355354 ADAM18Q9Y3Q7 739 aa5.26□□□□□ -1.57
CD47-201ENST00000355354 LNP1A1A4G5 178 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 GMFGO60234 142 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 SEC22BO75396 215 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 LEFTY1O75610 366 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 CSRP1P21291 193 aaKnown RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 AHRP35869 848 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 CD97P48960 835 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 ACADVLP49748 655 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 ZP1P60852 638 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 KYAT1Q16773 422 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 INSCQ1MX18 579 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 SPANXN3Q5MJ09 141 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 ZNF691Q5VV52 312 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 NOXRED1Q6NXP6 359 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 OR2T12Q8NG77 320 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 OR4Q3Q8NH05 313 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 WDR20Q8TBZ3 569 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 DNASE2BQ8WZ79 361 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 FBXO32Q969P5 355 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 TAPBPLQ9BX59 468 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 SCML2Q9UQR0 700 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 POLHQ9Y253 713 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 LSM2Q9Y333 95 aaKnown RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 MEIOCA2RUB1 952 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 OR2A25A4D2G3 310 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 CTSVO60911 334 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 PFDN1O60925 122 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 ODC1P11926 461 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 CD36P16671 472 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 LIMS1P48059 325 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 STX1BP61266 288 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 ST3GAL4Q11206 333 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 CAMK2GQ13555 558 aaPredicted RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 ZNF791Q3KP31 576 aaPredicted RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 DNAAF1Q8NEP3 725 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 OR6C4Q8NGE1 309 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 ACMSDQ8TDX5 336 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 MUL1Q969V5 352 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 MROQ9BYG7 248 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 MFSD1Q9H3U5 465 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 TMEM248Q9NWD8 314 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms