RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 TM4SF1P30408 202 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF585AQ6P3V2 769 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 TMPRSS7Q7RTY8 843 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 CARM1Q86X55 608 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 SLC2A12Q8TD20 617 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 SYT4Q9H2B2 425 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 GIMAP2Q9UG22 337 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 HSBP1L1C9JCN9 74 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 ITM2AO43736 263 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 TIMM8AO60220 97 aaPredicted RBP12.85□□□□□ -0.35
LMBR1-201ENST00000353442 BEST1O76090 585 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 PROS1P07225 676 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 KRBOX4Q5JUW0 171 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 IER5LQ5T953 404 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 PLCXD3Q63HM9 321 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.85□□□□□ -0.35
LMBR1-201ENST00000353442 PHC2Q8IXK0 858 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 LRRC25Q8N386 305 aaPredicted RBP12.85□□□□□ -0.35
LMBR1-201ENST00000353442 SLC5A8Q8N695 610 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 STT3BQ8TCJ2 826 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 MFRPQ9BY79 579 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 NRXN1Q9ULB1 1477 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 A0A0U1RQF3 1178 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 LCHNA4D1U4 455 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 PAHP00439 452 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 IFNA10P01566 189 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 PLA2G7Q13093 441 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF461Q8TAF7 563 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 RSC1A1Q92681 617 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 MS4A12Q9NXJ0 267 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 TULP2O00295 520 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 SEC61A1P61619 476 aaKnown RBP12.85□□□□□ -0.35
LMBR1-201ENST00000353442 RNF4P78317 190 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 MELKQ14680 651 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 SLC10A1Q14973 349 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 TMEM71Q6P5X7 295 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 FIGLAQ6QHK4 219 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 TXNDC15Q96J42 360 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 LRIG1Q96JA1 1093 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 LRFN5Q96NI6 719 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 ENKD1Q9H0I2 346 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 FNIP2Q9P278 1114 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 LOC105369274A0A096LPK9 316 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 OR5H15A6NDH6 313 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 OR5H14A6NHG9 310 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 OR5H1A6NKK0 313 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 SGK494L7N484 410 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 IFNA17P01571 189 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 DDCP20711 480 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 IMPDH1P20839 514 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 XCR1P46094 333 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 SERINC3Q13530 473 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 HABP2Q14520 560 aaPredicted RBP12.85□□□□□ -0.35
LMBR1-201ENST00000353442 LIN52Q52LA3 116 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 NIPAL1Q6NVV3 410 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 OR4N4Q8N0Y3 316 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 OR4K15Q8NH41 348 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 OR1S1Q8NH92 325 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 C16orf78Q8WTQ4 265 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 SPTSSAQ969W0 71 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 TWNKQ96RR1 684 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 LRRC3Q9BY71 257 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 CER1O95813 267 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 IFNA4P05014 189 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 AQP4P55087 323 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 CYBRD1Q53TN4 286 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 Q6ZSR6 202 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 SAMD12Q8N8I0 201 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF566Q969W8 418 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 PYURFQ96I23 114 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 ARHGAP39Q9C0H5 1083 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 LRRN3Q9H3W5 708 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 NANOGQ9H9S0 305 aa12.85□□□□□ -0.35
LMBR1-201ENST00000353442 TRBV2A0A0J9YWF9 115 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 HBQ1P09105 142 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 RPS2P15880 293 aaKnown RBP12.84□□□□□ -0.35
LMBR1-201ENST00000353442 RABIFP47224 123 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 PRKXP51817 358 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 COL28A1Q2UY09 1125 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 CEACAM19Q7Z692 300 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 TUBG2Q9NRH3 451 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 ERVK13-1Q9NX77 482 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 MGAT4CQ9UBM8 478 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 PIP5K1CO60331 668 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 MTHFD2P13995 350 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 F2RP25116 425 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 HTD2P86397 168 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 PIGGQ5H8A4 983 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 ETAA1Q9NY74 926 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 ZNF223Q9UK11 482 aaPredicted RBP12.84□□□□□ -0.35
LMBR1-201ENST00000353442 CEP170BQ9Y4F5 1589 aaPredicted RBP12.84□□□□□ -0.35
LMBR1-201ENST00000353442 G3V3Y1 287 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 HEXAP06865 529 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 PET100P0DJ07 73 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 EMP2P54851 167 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 MPPED2Q15777 294 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 OR9A4Q8NGU2 314 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 TSGA13Q96PP4 275 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 NUDT22Q9BRQ3 303 aa12.84□□□□□ -0.35
LMBR1-201ENST00000353442 WWTR1Q9GZV5 400 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms