RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 KCTD21Q4G0X4 260 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 C14orf28Q4W4Y0 310 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 TMEM35AQ53FP2 167 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 ZNF385BQ569K4 471 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 CRB2Q5IJ48 1285 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 DUS1LQ6P1R4 473 aaKnown RBP7.74□□□□□ -1.17
CD44-205ENST00000352818 ENPP6Q6UWR7 440 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 ABRAXAS1Q6UWZ7 409 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 ZNF621Q6ZSS3 439 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 USP51Q70EK9 711 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 CBLL1Q75N03 491 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 EIF3MQ7L2H7 374 aaKnown RBP7.74□□□□□ -1.17
CD44-205ENST00000352818 PTOV1Q86YD1 416 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 CLECL1Q8IZS7 167 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 C10orf111Q8N326 155 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 TRIML2Q8N7C3 387 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 FAM86B1Q8N7N1 296 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 ANKRD53Q8N9V6 530 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 ZNF740Q8NDX6 193 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 OR52N2Q8NGI0 321 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 OR52E1Q8NGJ3 308 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 OR4A15Q8NGL6 344 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 CDC26Q8NHZ8 85 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 NCLNQ969V3 563 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 TMBIM1Q969X1 311 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 KIAA1143Q96AT1 154 aaPredicted RBP7.74□□□□□ -1.17
CD44-205ENST00000352818 PYURFQ96I23 114 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 CCDC74BQ96LY2 380 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 FERD3LQ96RJ6 166 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 MYCBPQ99417 103 aaPredicted RBP7.74□□□□□ -1.17
CD44-205ENST00000352818 SEPHS2Q99611 448 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 TBCDQ9BTW9 1192 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 GABARAPL1Q9H0R8 117 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 OSGEPL1Q9H4B0 414 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 FGF22Q9HCT0 170 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 TMEM184CQ9NVA4 438 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 ERVK-11Q9UQG0 969 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 POLHQ9Y253 713 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 KCNK6Q9Y257 313 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 NTNG1Q9Y2I2 539 aa7.74□□□□□ -1.17
CD44-205ENST00000352818 CFAP20Q9Y6A4 193 aaKnown RBP7.74□□□□□ -1.17
CD44-205ENST00000352818 SMIM31A0A1B0GVY4 71 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 FAM221AA4D161 298 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 TRIM64A6NGJ6 449 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 TRIM64CA6NLI5 447 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 PDLIM1O00151 329 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 PLPP1O14494 284 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 NDUFS4O43181 175 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 PRKD3O94806 890 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 CPSF4O95639 269 aaKnown RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 DLGAP3O95886 979 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 KLK1P06870 262 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 PABPC4LP0CB38 370 aaKnown RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 ZNF23P17027 643 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 DDCP20711 480 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 RPL10P27635 214 aaKnown RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 PSMB5P28074 263 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 HTR1BP28222 390 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 KDELR2P33947 212 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 SHMT2P34897 504 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 BSGP35613 385 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 AHRP35869 848 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 MAGEA8P43361 318 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 TSFMP43897 325 aaKnown RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 MVDP53602 400 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 ARSFP54793 590 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 ITGA1P56199 1179 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 TAS2R50P59544 299 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 TUBA4AP68366 448 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 ADARB1P78563 741 aaKnown RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 PPP2R2BQ00005 443 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 C2orf80Q0P641 193 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 RBBP5Q15291 538 aaKnown RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 RGNQ15493 299 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 ZIC1Q15915 447 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.73□□□□□ -1.17
CD44-205ENST00000352818 Q71RC1 249 aaPredicted RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 PIWIL3Q7Z3Z3 882 aaKnown RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 NUDT13Q86X67 352 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 HIPK1Q86Z02 1210 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 TGIF2LYQ8IUE0 185 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 SLC30A8Q8IWU4 369 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 DHRSXQ8N5I4 330 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 CISD2Q8N5K1 135 aaKnown RBP7.73□□□□□ -1.17
CD44-205ENST00000352818 TBC1D19Q8N5T2 526 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 LMNTD1Q8N9Z9 388 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 FAM47BQ8NA70 645 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 C11orf65Q8NCR3 313 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 OR2A1Q8NGT9 310 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 OR5K1Q8NHB7 308 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 FBXO30Q8TB52 745 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 CREB3L4Q8TEY5 395 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 ZFPM2Q8WW38 1151 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 OR1E3Q8WZA6 343 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 RGMAQ96B86 450 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 SDCCAG3Q96C92 435 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 RNF31Q96EP0 1072 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 VPS50Q96JG6 964 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 CTRCQ99895 268 aa7.73□□□□□ -1.17
CD44-205ENST00000352818 YTHDF1Q9BYJ9 559 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms