RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 SHISA5Q8N114 240 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 ZNF540Q8NDQ6 660 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 OR2I1PQ8NGU4 316 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 S100ZQ8WXG8 99 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 PPCDCQ96CD2 204 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 MAP3K3Q99759 626 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 MROQ9BYG7 248 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 SLC6A16Q9GZN6 736 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 MYNNQ9NPC7 610 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 LRIT1Q9P2V4 623 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 NDRG4Q9ULP0 352 aaKnown RBP12.67□□□□□ -0.38
UBA3-201ENST00000349511 ENTPD2Q9Y5L3 495 aa12.67□□□□□ -0.38
UBA3-201ENST00000349511 FAM221BA6H8Z2 402 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 TNFSF14O43557 240 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 FAM20BO75063 409 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 JRKO75564 520 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 EPN2O95208 641 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 PROS1P07225 676 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 ZNF888P0CJ79 500 aaPredicted RBP12.66□□□□□ -0.38
UBA3-201ENST00000349511 ATXN8OSP0DMR3 200 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 GPX2P18283 190 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 EPHA2P29317 976 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 SERPINB1P30740 379 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 GFERP55789 205 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 BTN3A2P78410 334 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 SLAMF1Q13291 335 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 TMEM236Q5W0B7 351 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 TRIM40Q6P9F5 258 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 LINC00299Q6ZSB3 139 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 CBLL1Q75N03 491 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 EIF3MQ7L2H7 374 aaKnown RBP12.66□□□□□ -0.38
UBA3-201ENST00000349511 SNX29P2Q8IUI4 249 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 BAHD1Q8TBE0 780 aaPredicted RBP12.66□□□□□ -0.38
UBA3-201ENST00000349511 TAMM41Q96BW9 452 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 HSH2DQ96JZ2 352 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 ZNF300Q96RE9 604 aaPredicted RBP12.66□□□□□ -0.38
UBA3-201ENST00000349511 SARGQ9BW04 601 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 TWSG1Q9GZX9 223 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 PILRBQ9UKJ0 227 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 SAMHD1Q9Y3Z3 626 aaKnown RBP12.66□□□□□ -0.38
UBA3-201ENST00000349511 PCDHGA2Q9Y5H1 932 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 RNF215Q9Y6U7 377 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 PMF1-BGLAPU3KQ54 211 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 CFAP54Q96N23 3096 aa12.66□□□□□ -0.38
UBA3-201ENST00000349511 TMEM247A6NEH6 219 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 SLC9B1P1A6NJY1 282 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 RHPN2P1A8MT19 583 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 H0YGG7 62 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 RGS10O43665 173 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 FKBP9O95302 570 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 C6orf47O95873 294 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 NTRK1P04629 796 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 OR1D5P58170 312 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 ARF3P61204 181 aaPredicted RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 NCS1P62166 190 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 HBA1P69905 142 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 IFITM3Q01628 133 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 DGCR6Q14129 220 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 SLC5A12Q1EHB4 618 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 AMZ1Q400G9 498 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 C14orf28Q4W4Y0 310 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 ERICH5Q6P6B1 374 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 ADCK1Q86TW2 530 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 SLC35F3Q8IY50 421 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 Q8N9G6 341 aaPredicted RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 ACOT4Q8N9L9 421 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 DTWD2Q8NBA8 298 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 AVL9Q8NBF6 648 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 OR2L5Q8NG80 312 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 DYNC2LI1Q8TCX1 351 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 UBE2FQ969M7 185 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 EXOSC8Q96B26 276 aaKnown RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 COQ8BQ96D53 544 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 TGM7Q96PF1 710 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 ZFYVE21Q9BQ24 234 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 DPH2Q9BQC3 489 aaPredicted RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 ACOT13Q9NPJ3 140 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 PRDM7Q9NQW5 492 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 KRT84Q9NSB2 600 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 KIF17Q9P2E2 1029 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 PILRAQ9UKJ1 303 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 POMT2Q9UKY4 750 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 A0A0A6YYD5 115 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 AGRPO00253 132 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 DNAJB6O75190 326 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 SLC35G6P0C7Q6 338 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 GIMD1P0DJR0 217 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 PCSK2P16519 638 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 HIST1H1TP22492 207 aaPredicted RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 PTGER1P34995 402 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 ST13P50502 369 aaKnown RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 VSX2P58304 361 aaPredicted RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 INAQ16352 499 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 NDUFAF5Q5TEU4 345 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 GPR155Q7Z3F1 870 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 TSPYL5Q86VY4 417 aaPredicted RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 CCDC71Q8IV32 467 aaPredicted RBP12.65□□□□□ -0.38
UBA3-201ENST00000349511 MFSD4AQ8N468 514 aa12.65□□□□□ -0.38
UBA3-201ENST00000349511 SVOPQ8N4V2 548 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms