RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SLC35C2Q9NQQ7 365 aa14.58□□□□□ -0.08
TSPAN4-201ENST00000346501 C1orf109Q9NX04 203 aa14.58□□□□□ -0.08
TSPAN4-201ENST00000346501 CNIH4Q9P003 139 aa14.58□□□□□ -0.08
TSPAN4-201ENST00000346501 ERRFI1Q9UJM3 462 aaPredicted RBP14.58□□□□□ -0.08
TSPAN4-201ENST00000346501 PRRG2O14669 202 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 TM9SF1O15321 606 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 CDC40O60508 579 aaKnown RBP eCLIP14.57□□□□□ -0.082e-6■■■■■ 31.7
TSPAN4-201ENST00000346501 SLC19A2O60779 497 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 DDCP20711 480 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 DCAF7P61962 342 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 KCNJ2P63252 427 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 RAE1P78406 368 aaKnown RBP14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 SRSF1Q07955 248 aaKnown RBP eCLIP14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 PRICKLE4Q2TBC4 344 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 ARL13AQ5H913 290 aaPredicted RBP14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 TBCELQ5QJ74 424 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 NOXRED1Q6NXP6 359 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 LRIG3Q6UXM1 1119 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 RNF165Q6ZSG1 346 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 FJX1Q86VR8 437 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 CCDC116Q8IYX3 515 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 FAM9CQ8IZT9 166 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 KIRREL3Q8IZU9 778 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 C17orf47Q8NEP4 570 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 OR2M7Q8NG81 312 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 C16orf52Q8NHV5 167 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 ERP27Q96DN0 273 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 CCT7Q99832 543 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 MECRQ9BV79 373 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 KCNK9Q9NPC2 374 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 MYNNQ9NPC7 610 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 BOKQ9UMX3 212 aaPredicted RBP14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 TMED5Q9Y3A6 229 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 TRAF6Q9Y4K3 522 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 POLR3HQ9Y535 204 aaPredicted RBP14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 POLEQ07864 2286 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 DOPEY2Q9Y3R5 2298 aa14.57□□□□□ -0.08
TSPAN4-201ENST00000346501 PRRC2CQ9Y520 2896 aaKnown RBP14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 TMEM114B3SHH9 223 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 SLITRK5O94991 958 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 SNUPNO95149 360 aaKnown RBP14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 ZWINTO95229 277 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 BPGMP07738 259 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 FGF4P08620 206 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 FBXO45P0C2W1 286 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 MAPK1P28482 360 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 KRT20P35900 424 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 PPIAP62937 165 aaKnown RBP14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 ZNF791Q3KP31 576 aaPredicted RBP14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 SH2D4BQ5SQS7 431 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 C1QL3Q5VWW1 255 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 KANK2Q63ZY3 851 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 MMP21Q8N119 569 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 ADCY4Q8NFM4 1077 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 CNRIP1Q96F85 164 aaPredicted RBP14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 MAT2BQ9NZL9 334 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 HEY2Q9UBP5 337 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 B4GALT7Q9UBV7 327 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 NPFFR2Q9Y5X5 522 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 ACTL7BQ9Y614 415 aa14.56□□□□□ -0.08
TSPAN4-201ENST00000346501 A0A1W2PS29 197 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 CCL21O00585 134 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 ACOX3O15254 700 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 TYROBPO43914 113 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 HS6ST1O60243 411 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 HSPA4LO95757 839 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 LDLRP01130 860 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 CT62P0C5K7 136 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 LINC00032P0C843 101 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 GP1BBP13224 206 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 PRPH2P23942 346 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 RFC3P40938 356 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 SERPINB4P48594 390 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 PSPHP78330 225 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 RPS6KA2Q15349 733 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 ARHGAP11AQ6P4F7 1023 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 FAM111BQ6SJ93 734 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 ZCCHC23Q6ZST2 131 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 TICAM1Q8IUC6 712 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 SPPL2CQ8IUH8 684 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 ZNF615Q8N8J6 731 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 OR5M3Q8NGP4 307 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 AGR3Q8TD06 166 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 ZNF675Q8TD23 568 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 PAQR8Q8TEZ7 354 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 TWIST2Q8WVJ9 160 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 DIO2Q92813 273 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 RELTQ969Z4 430 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 HSPBAP1Q96EW2 488 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 C11orf24Q96F05 449 aaPredicted RBP14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 PGM2Q96G03 612 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 PPP3R2Q96LZ3 170 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 ZNF681Q96N22 645 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 ZIM3Q96PE6 472 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 IL1RL2Q9HB29 575 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 TAS2R9Q9NYW1 312 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 SH3BGRL2Q9UJC5 107 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 DNAJC15Q9Y5T4 150 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 LRRK2Q5S007 2527 aa14.55□□□□□ -0.08
TSPAN4-201ENST00000346501 NPIPB8E9PQR5 432 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms