RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 DKKL1Q9UK85 242 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 ZNF736B4DX44 427 aaPredicted RBP18.55■□□□□ 0.56
HDAC4-201ENST00000345617 ADAP00813 363 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 NKX3-2P78367 333 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 MZT1Q08AG7 82 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 LINGO4Q6UY18 593 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 AKR1C4P17516 323 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 GCGRP47871 477 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 THBS3P49746 956 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 CASP7P55210 303 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 RAP2BP61225 183 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 METAP1DQ6UB28 335 aaPredicted RBP18.55■□□□□ 0.56
HDAC4-201ENST00000345617 SPARTQ8N0X7 666 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 TRAM1L1Q8N609 369 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 SIMC1Q8NDZ2 872 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 LRR1Q96L50 414 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 FMO6PO60774 539 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 PRKCGP05129 697 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 AFF3P51826 1226 aaKnown RBP18.55■□□□□ 0.56
HDAC4-201ENST00000345617 SGPP2Q8IWX5 399 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 RDH10Q8IZV5 341 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 OR9I1Q8NGQ6 314 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 TMEM74Q96NL1 305 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 TSPAN10Q9H1Z9 355 aaPredicted RBP18.55■□□□□ 0.56
HDAC4-201ENST00000345617 SUV39H2Q9H5I1 410 aa18.55■□□□□ 0.56
HDAC4-201ENST00000345617 SLC22A5O76082 557 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 SLC22A25Q6T423 547 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 IDO2Q6ZQW0 420 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 SLC38A1Q9H2H9 487 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 BRF2Q9HAW0 419 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 NPC1O15118 1278 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 H2BFMP0C1H6 154 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 PMS2P3Q13401 168 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 MYLIPQ8WY64 445 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 HDHD5Q9BXW7 423 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 SPDEFO95238 335 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 PTPN6P29350 595 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 GDPD4Q6W3E5 623 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 ZNF619Q8N2I2 560 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 INPP5EQ9NRR6 644 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 A0A1W2PS29 197 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 WNT4P56705 351 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 TAGLNQ01995 201 aaKnown RBP18.54■□□□□ 0.56
HDAC4-201ENST00000345617 GALNT1Q10472 559 aaPredicted RBP18.54■□□□□ 0.56
HDAC4-201ENST00000345617 RCAN2Q14206 197 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 PAFAH1B3Q15102 231 aaKnown RBP18.54■□□□□ 0.56
HDAC4-201ENST00000345617 GPR157Q5UAW9 335 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 SLC15A4Q8N697 577 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 MUSKO15146 869 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 NCBP2-AS2Q69YL0 99 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 MED30Q96HR3 178 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 SLC25A31Q9H0C2 315 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 ZFR2Q9UPR6 939 aaKnown RBP18.54■□□□□ 0.56
HDAC4-201ENST00000345617 UBFD1O14562 309 aaKnown RBP18.54■□□□□ 0.56
HDAC4-201ENST00000345617 TP53P04637 393 aaPredicted RBP18.54■□□□□ 0.56
HDAC4-201ENST00000345617 NDUFV2P19404 249 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 MMP12P39900 470 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 SDHAF4Q5VUM1 108 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 ELP4Q96EB1 424 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 GPR88Q9GZN0 384 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 MTCL1Q9Y4B5 1905 aaKnown RBP18.54■□□□□ 0.56
HDAC4-201ENST00000345617 A0A0D9SG52 128 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 C6orf47O95873 294 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 RFPL4BQ6ZWI9 263 aa18.54■□□□□ 0.56
HDAC4-201ENST00000345617 GJE1A6NN92 205 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 H3BMQ9 156 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 M0R2N6 131 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 SMAD9O15198 467 aaKnown RBP18.53■□□□□ 0.56
HDAC4-201ENST00000345617 TYRP14679 529 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 TCEA1P23193 301 aaKnown RBP18.53■□□□□ 0.56
HDAC4-201ENST00000345617 RELAQ04206 551 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 GRIK5Q16478 980 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 TAAR8Q969N4 342 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 COG8Q96MW5 612 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 ACTRT3Q9BYD9 372 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 POLMQ9NP87 494 aaPredicted RBP18.53■□□□□ 0.56
HDAC4-201ENST00000345617 FCF1Q9Y324 198 aaKnown RBP18.53■□□□□ 0.56
HDAC4-201ENST00000345617 CCL22O00626 93 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 POU6F2P78424 691 aaPredicted RBP18.53■□□□□ 0.56
HDAC4-201ENST00000345617 CAP1Q01518 475 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 NOXRED1Q6NXP6 359 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 FAM124AQ86V42 546 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 OR2M2Q96R28 347 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 KRBA1A5PL33 1030 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 AKAIN1P0CW23 69 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 PRPS1P60891 318 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 ERVK-25P63136 954 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 GALNT2Q10471 571 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 CARD16Q5EG05 197 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 FUT10Q6P4F1 479 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 OR4K14Q8NGD5 310 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 GPR152Q8TDT2 470 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 TMEM125Q96AQ2 219 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 PEX14O75381 377 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 SIX3O95343 332 aaPredicted RBP18.53■□□□□ 0.56
HDAC4-201ENST00000345617 AMY2AP04746 511 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 ADH7P40394 386 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 LEPRP48357 1165 aaKnown RBP18.53■□□□□ 0.56
HDAC4-201ENST00000345617 KCTD20Q7Z5Y7 419 aa18.53■□□□□ 0.56
HDAC4-201ENST00000345617 LILRB4Q8NHJ6 448 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms