RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 EPPINO95925 133 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 FHP07954 510 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 CD247P20963 164 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 EPHA8P29322 1005 aaPredicted RBP12.73□□□□□ -0.37
CDC42-202ENST00000344548 MLLT3P42568 568 aaPredicted RBP12.73□□□□□ -0.37
CDC42-202ENST00000344548 ADARB1P78563 741 aaKnown RBP12.73□□□□□ -0.37
CDC42-202ENST00000344548 HLA-BQ31612 363 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 SLC16A11Q8NCK7 471 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 OR5K1Q8NHB7 308 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 PEX11GQ96HA9 241 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 OR7D2Q96RA2 312 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 MBOAT4Q96T53 435 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 ANKHQ9HCJ1 492 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 MS4A12Q9NXJ0 267 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 EPHA6Q9UF33 1036 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 PADI2Q9Y2J8 665 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 TESMINQ9Y4I5 508 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 CSNK1G3Q9Y6M4 447 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 EMC8O43402 210 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 JRKO75564 520 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 ZBTB11O95625 1053 aaPredicted RBP12.73□□□□□ -0.37
CDC42-202ENST00000344548 RRM2P31350 389 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 ARRB1P49407 418 aaPredicted RBP12.73□□□□□ -0.37
CDC42-202ENST00000344548 ITGA1P56199 1179 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 LPAL2Q16609 132 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 LACC1Q8IV20 430 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 SAP25Q8TEE9 199 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 SLC35A4Q96G79 324 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 AHCYL2Q96HN2 611 aaKnown RBP12.73□□□□□ -0.37
CDC42-202ENST00000344548 COL21A1Q96P44 957 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 RAB33BQ9H082 229 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 TOR3AQ9H497 397 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 Q9H521 79 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 GIMAP4Q9NUV9 329 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 RHCGQ9UBD6 479 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 CLDN16Q9Y5I7 305 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 A0A1B0GTQ1 180 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 HYKKA2RU49 373 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 C5orf58C9J3I9 102 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 SMIM18P0DKX4 95 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 GNSP15586 552 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 PORP16435 677 aaPredicted RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 ZNF10P21506 573 aaPredicted RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 PPP2R1BP30154 601 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 TLX1P31314 330 aaPredicted RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 DAPP51397 102 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 EPHA4P54764 986 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 BTG2P78543 158 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 MGAT2Q10469 447 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 IFI44LQ53G44 452 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 ZNF628Q5EBL2 1059 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 PERM1Q5SV97 790 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 FHL5Q5TD97 284 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 GUSBP11Q6P575 273 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 SHQ1Q6PI26 577 aaKnown RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 OR52J3Q8NH60 311 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 SFXN5Q8TD22 340 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 PDE7BQ9NP56 450 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 ATXN7L1Q9ULK2 861 aaPredicted RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 PLCL2Q9UPR0 1127 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 CLCA2Q9UQC9 943 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 SAMHD1Q9Y3Z3 626 aaKnown RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 GPR179Q6PRD1 2367 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 A6NHS1 94 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 FFAR1O14842 300 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 HS6ST1O60243 411 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 FCMRO60667 390 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 SEC24DO94855 1032 aaPredicted RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 GPR75O95800 540 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 FESP07332 822 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 NR2F1P10589 423 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 THRBP10828 461 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 FOLR1P15328 257 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 EPHA2P29317 976 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 ZNF574Q6ZN55 896 aaPredicted RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 GALNT5Q7Z7M9 940 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 TSPYL5Q86VY4 417 aaPredicted RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 OR2L13Q8N349 312 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 SVOPLQ8N434 492 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 DHRSXQ8N5I4 330 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 TTC29Q8NA56 475 aaPredicted RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 CCDC74AQ96AQ1 378 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 ZDHHC12Q96GR4 267 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 ZNF300Q96RE9 604 aaPredicted RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 DDX18Q9NVP1 670 aaKnown RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 IRAK4Q9NWZ3 460 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 THUMPD1Q9NXG2 353 aaKnown RBP12.72□□□□□ -0.37
CDC42-202ENST00000344548 P2RX2Q9UBL9 471 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 MAU2Q9Y6X3 613 aa12.72□□□□□ -0.37
CDC42-202ENST00000344548 HRKO00198 91 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 SIGLEC6O43699 453 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 H6PDO95479 791 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 CFIP05156 583 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 CAPGP40121 348 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 RAB38P57729 211 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 PRR5P85299 388 aa12.71□□□□□ -0.37
CDC42-202ENST00000344548 GANABQ14697 944 aaKnown RBP12.71□□□□□ -0.37
CDC42-202ENST00000344548 EXOSC7Q15024 291 aaKnown RBP12.71□□□□□ -0.37
CDC42-202ENST00000344548 PRICKLE4Q2TBC4 344 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms