RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 FAM111BQ6SJ93 734 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 BNC2Q6ZN30 1099 aaPredicted RBP13.48□□□□□ -0.25
ERCC1-203ENST00000340192 FAM47EQ6ZV65 393 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 SPPL2CQ8IUH8 684 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 CHERPQ8IWX8 916 aaKnown RBP13.48□□□□□ -0.25
ERCC1-203ENST00000340192 LRRC25Q8N386 305 aaPredicted RBP13.48□□□□□ -0.25
ERCC1-203ENST00000340192 ZNF441Q8N8Z8 693 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 ADCY4Q8NFM4 1077 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 TCP10LQ8TDR4 215 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 ZNF681Q96N22 645 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 FAM173AQ9BQD7 235 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 TRMOQ9BU70 441 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 MECRQ9BV79 373 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 MAT2BQ9NZL9 334 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 TINAGQ9UJW2 476 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 RAB21Q9UL25 225 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 CRYBG3Q68DQ2 2970 aa13.48□□□□□ -0.25
ERCC1-203ENST00000340192 NBPF19A0A087WUL8 3843 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 CDC40O60508 579 aaKnown RBP eCLIP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 RSL1D1O76021 490 aaKnown RBP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 ABOP16442 354 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 SOX18P35713 384 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 GSTM5P46439 218 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 DNASE1L1P49184 302 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 NR0B1P51843 470 aaKnown RBP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 PPIAP62937 165 aaKnown RBP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 PLGLB1Q02325 96 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 ZNF844Q08AG5 666 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 ZNF763Q0D2J5 394 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 EXOSC7Q15024 291 aaKnown RBP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 LTB4RQ15722 352 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 C3AR1Q16581 482 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 KRT71Q3SY84 523 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 HIST2H2BCQ6DN03 193 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 MYO7BQ6PIF6 2116 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 Q6ZPB1 254 aaPredicted RBP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 GK5Q6ZS86 529 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 MAMDC2Q7Z304 686 aaPredicted RBP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 FGD2Q7Z6J4 655 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 DND1Q8IYX4 353 aaKnown RBP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 TAGAPQ8N103 731 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 SIMC1Q8NDZ2 872 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 FAM13CQ8NE31 585 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 OR10G3Q8NGC4 313 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 OR52N2Q8NGI0 321 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 OR5M3Q8NGP4 307 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 CDC26Q8NHZ8 85 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 PAQR8Q8TEZ7 354 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 ADIPOR1Q96A54 375 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 TP53INP1Q96A56 240 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 EXOSC8Q96B26 276 aaKnown RBP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 TTTY12Q9BZ98 90 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 SH2D2AQ9NP31 389 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 RRAGDQ9NQL2 400 aaPredicted RBP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 PFDN4Q9NQP4 134 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 ZNF639Q9UID6 485 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 DTX4Q9Y2E6 619 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 FIS1Q9Y3D6 152 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 CCL27Q9Y4X3 112 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 POLR3HQ9Y535 204 aaPredicted RBP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 PTGDR2Q9Y5Y4 395 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 CHCHD2Q9Y6H1 151 aaPredicted RBP13.47□□□□□ -0.25
ERCC1-203ENST00000340192 NCKAP5O14513 1909 aa13.47□□□□□ -0.25
ERCC1-203ENST00000340192 FAM166BA8MTA8 275 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 ACOT7O00154 380 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 AZIN1O14977 448 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 PDE9AO76083 593 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 GLSO94925 669 aaPredicted RBP13.46□□□□□ -0.25
ERCC1-203ENST00000340192 CHRNGP07510 517 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 PCSK2P16519 638 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 GPX3P22352 226 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 PIGAP37287 484 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 DUSP8Q13202 625 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 NTRK2Q16620 822 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 TRMT12Q53H54 448 aaKnown RBP13.46□□□□□ -0.25
ERCC1-203ENST00000340192 PRAMEF20Q5VT98 475 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 SLC22A10Q63ZE4 541 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 TMEM64Q6YI46 380 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 CCDC116Q8IYX3 515 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 C17orf47Q8NEP4 570 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 FAM76AQ8TAV0 307 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 CTHRC1Q96CG8 243 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 CCDC120Q96HB5 630 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 DEFB127Q9H1M4 99 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 RYDENQ9NUL5 291 aaKnown RBP13.46□□□□□ -0.25
ERCC1-203ENST00000340192 BCAP29Q9UHQ4 241 aa13.46□□□□□ -0.25
ERCC1-203ENST00000340192 A0A1B0GTH9 108 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 TMEM233B4DJY2 109 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 SLC28A1O00337 649 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 TYROBPO43914 113 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 NPHS1O60500 1241 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 SEC22BO75396 215 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 LRATO95237 230 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 CBX7O95931 251 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 DDCP20711 480 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 NRG3P56975 720 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 MRPS35P82673 323 aaKnown RBP13.45□□□□□ -0.26
ERCC1-203ENST00000340192 C2orf80Q0P641 193 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 FOXO1Q12778 655 aa13.45□□□□□ -0.26
ERCC1-203ENST00000340192 ZNF628Q5EBL2 1059 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms