RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 RNF186Q9NXI6 227 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 HCN2Q9UL51 889 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 SLC45A1Q9Y2W3 748 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 PRAMEF25A6NGN4 478 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 OR5F1O95221 314 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 SCG5P05408 212 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 TYRP14679 529 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 PTX3P26022 381 aaPredicted RBP13.41□□□□□ -0.26
PCDH8-201ENST00000338862 CAMK1Q14012 370 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 SUZ12Q15022 739 aaKnown RBP13.41□□□□□ -0.26
PCDH8-201ENST00000338862 CHAC2Q8WUX2 184 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 DNAJA3Q96EY1 480 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 PPIEQ9UNP9 301 aaKnown RBP13.41□□□□□ -0.26
PCDH8-201ENST00000338862 NTNG1Q9Y2I2 539 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 INSL5Q9Y5Q6 135 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 LEFTY2O00292 366 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 ADAMTS4O75173 837 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 GCM2O75603 506 aaPredicted RBP13.41□□□□□ -0.26
PCDH8-201ENST00000338862 PAHP00439 452 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 CLTBP09497 229 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 CD79BP40259 229 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 MTNR1AP48039 350 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 SLC6A12P48065 614 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 FNDC3BQ53EP0 1204 aaKnown RBP13.41□□□□□ -0.26
PCDH8-201ENST00000338862 MZT2AQ6P582 158 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 CCDC28AQ8IWP9 274 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 GLYATL1Q969I3 302 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 SNX18Q96RF0 628 aa13.41□□□□□ -0.26
PCDH8-201ENST00000338862 SAGP10523 405 aaPredicted RBP13.4□□□□□ -0.26
PCDH8-201ENST00000338862 PRG2P13727 222 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 GIPRP48546 466 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 SRP9P49458 86 aaKnown RBP13.4□□□□□ -0.26
PCDH8-201ENST00000338862 RAE1P78406 368 aaKnown RBP13.4□□□□□ -0.26
PCDH8-201ENST00000338862 WDR45BQ5MNZ6 344 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 SAXO2Q658L1 398 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 ANKRD54Q6NXT1 300 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 WFDC6Q9BQY6 131 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 NANSQ9NR45 359 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 MRPL39Q9NYK5 338 aaKnown RBP13.4□□□□□ -0.26
PCDH8-201ENST00000338862 CENPBD1B2RD01 187 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 RNASET2O00584 256 aaKnown RBP13.4□□□□□ -0.26
PCDH8-201ENST00000338862 PCCBP05166 539 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 CD3GP09693 182 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.4□□□□□ -0.26
PCDH8-201ENST00000338862 SYT9Q86SS6 491 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 ZFPM2Q8WW38 1151 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 TM9SF4Q92544 642 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 FERD3LQ96RJ6 166 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 CUEDC1Q9NWM3 386 aaPredicted RBP13.4□□□□□ -0.26
PCDH8-201ENST00000338862 NCKAP1Q9Y2A7 1128 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 PLXNA1Q9UIW2 1896 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 J3QLW9 94 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 K7ESM1 405 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 FURINP09958 794 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 ZDHHC11BP0C7U3 371 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 GNSP15586 552 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 ZNF19P17023 458 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 CLDN2P57739 230 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 MTAPQ13126 283 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 ZNF79Q15937 498 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 ZNF558Q96NG5 402 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 EFCAB11Q9BUY7 163 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 SRRQ9GZT4 340 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 DMRT3Q9NQL9 472 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 TMPRSS11EQ9UL52 423 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 MGAT4AQ9UM21 535 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 MGAT4BQ9UQ53 548 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 PCDHGB2Q9Y5G2 931 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 GREB1Q4ZG55 1949 aa13.4□□□□□ -0.26
PCDH8-201ENST00000338862 CHURC1-FNTBB4DL54 471 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 ZNF670-ZNF695F2Z2N8 137 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 TNFRSF10AO00220 468 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 DHFRP00374 187 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 C8AP07357 584 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 NTSP30990 170 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 AHRP35869 848 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 XCR1P46094 333 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 FAPQ12884 760 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 GPR50Q13585 617 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 PUM1Q14671 1186 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCDH8-201ENST00000338862 GPR68Q15743 365 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 SMUG1Q53HV7 270 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 ZNF311Q5JNZ3 666 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 FAM27D1Q5T7N8 215 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 OR4N5Q8IXE1 308 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 CYB561A3Q8NBI2 242 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 KCT2Q8NC54 265 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 OR52I1Q8NGK6 324 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 UBTD2Q8WUN7 234 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 ECHDC3Q96DC8 303 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 SIPA1Q96FS4 1042 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 IGSF21Q96ID5 467 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 QRFPRQ96P65 431 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 SDHCQ99643 169 aaPredicted RBP13.39□□□□□ -0.27
PCDH8-201ENST00000338862 TREX2Q9BQ50 279 aaPredicted RBP13.39□□□□□ -0.27
PCDH8-201ENST00000338862 BHLHE41Q9C0J9 482 aaPredicted RBP13.39□□□□□ -0.27
PCDH8-201ENST00000338862 KLHL28Q9NXS3 571 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 ADAM30Q9UKF2 790 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 ENTPD4Q9Y227 616 aa13.39□□□□□ -0.27
PCDH8-201ENST00000338862 KCNE1BA0A087WTH5 132 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms